Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 GeneticVariation group BEFREE High-grade neuroepithelial tumor with BCOR exon 15 internal tandem duplication-a comprehensive clinical, radiographic, pathologic, and genomic analysis. 31104347 2020
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 GeneticVariation group BEFREE "Central nervous system high-grade neuroepithelial tumor with BCOR alteration" is a recently described entity with characteristic internal tandem duplications within exon 15 of the BCOR gene (hereafter: CNS HGNET-BCOR ex15 ITD). 30816933 2019
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 Biomarker group BEFREE Two tumors were classified as MC pilocytic astrocytoma of the posterior fossa, one as MC CNS high grade neuroepithelial tumor with BCOR alteration and one as MC control tissue, inflammatory tumor microenvironment. 31661039 2019
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 Biomarker group BEFREE In conclusion, we think CNS HGNET-BCOR are a certain type of neuroepithelial tumor relatively close to glioma, not CCSK or URCS/PMMTI occurring in the CNS. 29226988 2018
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 Biomarker group BEFREE Early Wound Site Seeding in a Patient with Central Nervous System High-Grade Neuroepithelial Tumor with BCOR Alteration. 29859355 2018
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 GeneticVariation group BEFREE The pathologic diagnosis was amended after genomic profiling for 6 patients (19%), including a high-grade glioma to pilocytic astrocytoma, medulloblastoma to pineoblastoma, ependymoma to high-grade glioma, and medulloblastoma to CNS high-grade neuroepithelial tumor with BCOR alteration. 28453743 2017
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 GeneticVariation group BEFREE The central nervous system (CNS) high-grade neuroepithelial tumor with BCOR alteration (CNS HGNET-BCOR) is a recently described molecular entity. 28704208 2017
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 GeneticVariation group BEFREE High grade neuroepithelial tumor of the central nervous system with BCOR alteration (CNS HGNET-BCOR) is a recently described new tumor entity with a dismal prognosis. 27825128 2016
Entrez Id: 54880
Gene Symbol: BCOR
BCOR
0.090 GeneticVariation group BEFREE These new molecular entities, designated "CNS neuroblastoma with FOXR2 activation (CNS NB-FOXR2)," "CNS Ewing sarcoma family tumor with CIC alteration (CNS EFT-CIC)," "CNS high-grade neuroepithelial tumor with MN1 alteration (CNS HGNET-MN1)," and "CNS high-grade neuroepithelial tumor with BCOR alteration (CNS HGNET-BCOR)," will enable meaningful clinical trials and the development of therapeutic strategies for patients affected by poorly differentiated CNS tumors. 26919435 2016
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.030 GeneticVariation group BEFREE Multiplex ligation-dependent probe amplification analysis is useful for detecting a copy number gain of the FGFR1 tyrosine kinase domain in dysembryoplastic neuroepithelial tumors. 30825062 2019
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.030 Biomarker group BEFREE Droplet digital PCR is a powerful technique to demonstrate frequent FGFR1 duplication in dysembryoplastic neuroepithelial tumors. 27791984 2017
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.030 Biomarker group BEFREE Germline and somatic FGFR1 abnormalities in dysembryoplastic neuroepithelial tumors. 26920151 2016
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.030 AlteredExpression group BEFREE O(6)-methylguanine-DNA methyltransferase (MGMT) mRNA expressions were examined in 100 neuroepithelial tumors by real-time quantitative reverse transcription-polymerase chain reaction (RT-PCR) using SYBR Green I. 12455055 2003
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.030 Biomarker group BEFREE The mean MGMT/beta2-microglobulin (beta2-MG) ratio for 130 neuroepithelial tumors was 8.2 +/- 17.8. 11908869 2001
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.030 AlteredExpression group BEFREE Thirty-seven preliminary individual adjuvant therapies (IAT) based on RT-PCR results, mainly in MGMT expression, were performed on 30 consecutive patients with neuroepithelial tumors. 10894369 2000
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation group BEFREE Genetic alterations in uncommon low-grade neuroepithelial tumors: BRAF, FGFR1, and MYB mutations occur at high frequency and align with morphology. 26810070 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation group BEFREE An institutional cohort of 105 brain tumors (51 dysembryoplastic neuroepithelial tumors (DNTs), 14 subependymal giant cell astrocytomas (SEGAs), 12 glioblastoma with neuronal marker expression (GBM-N), and 28 pleomorphic xanthoastrocytomas (PXAs)) from 100 patients were investigated for the presence of BRAF(V600E) by direct sequencing. 25346165 2015
Entrez Id: 5465
Gene Symbol: PPARA
PPARA
0.010 Biomarker group BEFREE Corrigendum to "PPARs in Human Neuroepithelial Tumors: PPAR Ligands as Anticancer Therapies for the Most Common Human Neuroepithelial Tumors". 31428141 2020
Entrez Id: 23440
Gene Symbol: OTP
OTP
0.010 AlteredExpression group BEFREE Expression of OTP appears to correlate with poorer prognosis in pulmonary carcinoids; however, its expression patterns in other NE/neuroepithelial tumors need further investigation. 30523500 2019
Entrez Id: 947
Gene Symbol: CD34
CD34
0.010 Biomarker group BEFREE Ganglioglioma and pleomorphic xanthoastrocytoma were the histologic types with the strongest association with CD34 positivity with an odds ratio of 9.2 and 10.4, respectively, compared with dysembryoplastic neuroepithelial tumors. 30308344 2019
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.010 GeneticVariation group BEFREE H3F3A-G34R mutant high grade neuroepithelial neoplasms with glial and dysplastic ganglion cell components. 31109382 2019
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.010 GeneticVariation group BEFREE H3F3A-G34R mutant high grade neuroepithelial neoplasms with glial and dysplastic ganglion cell components. 31109382 2019
Entrez Id: 4311
Gene Symbol: MME
MME
0.010 GeneticVariation group BEFREE The aim of this study was to evaluate, for the first time, the anti-tumor activity of Amblyomin-X in 4 primary cultures derived from pediatric anaplastic posterior fossa EPN, Group A (anaplastic, WHO grade III) and one primary culture of a high grade neuroepithelial tumor with MN1 alteration, which was initially misdiagnosed as EPN: i) by in vitro assays: comparisons of temozolomide and cisplatin; ii) by intracranial xenograft model. 31292491 2019
Entrez Id: 4330
Gene Symbol: MN1
MN1
0.010 Biomarker group BEFREE Recent genomic profiling identified a subset of CNS embryonal tumors with astroblastoma-like morphology that harbored MN1 gene fusions, termed "CNS high-grade neuroepithelial tumors with MN1 alteration" (CNS-HGNET-MN1). 28960623 2018
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.010 GeneticVariation group BEFREE Internal tandem duplication of B-cell CLL/lymphoma 6 (BCL6)-interacting co-repressor (BCOR) exon 15 has recently been described in clear cell sarcoma of kidney, central nervous system high-grade neuroepithelial tumor with BCOR alteration, and primitive myxoid mesenchymal tumor of infancy. 28256570 2017