Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE Out of these, the LD-block 3 in calpastatin, tagged by SNPs located at 7-98566391 and 7-98581038, had a significant effect on tenderness with the TG-CG diplotype being approximately 1 kg more tender than the toughest diplotype, TG-CG. 29520298 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 AlteredExpression phenotype BEFREE The present results suggest that meat tenderness in Nellore cattle does not directly depend on the expression of the CAPN1 and CAPN2 genes, but is associated with the expression of other genes such as CAST2, HSP90AA1, DNAJA1 and HSPB1. 29331838 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 AlteredExpression phenotype BEFREE The improved tenderness in both prime and bull meat was associated with a lower myofibrillar fragmentation index and reduced calpain 1 activity which indicated the mechanism of tenderisation was different from that which occurred in chill aged meat. 29751219 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE EB- or XR-irradiated samples showed slower autolysis of calpain-1; however, beef tenderness was not affected. 29107867 2018
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE Single nucleotide polymorphisms (SNPs) carried in calpain (CAPN1), calpastatin (CAST), and leptin (LEP) genes are associated with meat tenderness. 28525658 2017
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Our results indicate that both calpain-1 and calpain-2 may contribute to the postmortem improvement of beef tenderness, with calpain-1 being responsible for the tenderness improvement early postmortem and calpain-2 responsible for additional tenderization during extended aging. 28527364 2017
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE The micromolar calcium activated neutral protease <i>(CAPN1)</i> and calpastatin <i>(CAST)</i> have been widely regarded as genes related to muscle growth and meat tenderness. 28713829 2017
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Single nucleotide polymorphisms (SNPs) carried in calpain (CAPN1), calpastatin (CAST), and leptin (LEP) genes are associated with meat tenderness. 28525658 2017
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 Biomarker phenotype BEFREE The micromolar calcium activated neutral protease <i>(CAPN1)</i> and calpastatin <i>(CAST)</i> have been widely regarded as genes related to muscle growth and meat tenderness. 28713829 2017
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 AlteredExpression phenotype BEFREE Meat tenderness and inhibitory activity of calpastatin may be associated with divergent temperament indices in zebu cattle. 28759886 2017
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Combining beef cattle data identified correlated SNPs representing CAPN1 (chr29:44 M+) and CAST (chr 7:96 M+) loci affecting beef tenderness, showing pleiotropic effects in dairy cattle. 28835686 2017
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE Combining beef cattle data identified correlated SNPs representing CAPN1 (chr29:44 M+) and CAST (chr 7:96 M+) loci affecting beef tenderness, showing pleiotropic effects in dairy cattle. 28835686 2017
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE The objectives of this study were to characterize the allelic and genotypic frequencies of polymorphisms in the µ-calpain and calpastatin genes, and to assess their association with meat tenderness and animal growth in Nellore cattle. 28218779 2017
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 AlteredExpression phenotype BEFREE In conclusion, ZH supplementation improved hypertrophy, meat production, and debone yield in Nellore heifers, which led to decreased tenderness and to increased mRNA expression in the calpain-calpastatin system. 27427783 2016
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE The CAPN1:c.1589G>A (Val530Ile) SNP marker displayed significant effect on the meat tenderness score which is strongly supported by molecular modeling of the CAPN1:c.1589G>A (Val530Ile) variant that inhibits CAST protein from binding more strongly than the wild-type protein, which may explain its effect on meat tenderness. 24468663 2014
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE The objective of this study was to evaluate the effects of seven single nucleotide polymorphisms (SNPs) in Calpain 1 and Calpastatin genes previously associated with meat tenderness attributes in other cattle breeds in Korean Hanwoo cattle. 24468663 2014
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 GeneticVariation phenotype BEFREE Two favorable CAPN1-4751 alleles increased tenderness of AT-striploin, TS-striploin, and rump steaks by 6.5, 4.3, and 3.9 units, and overall liking by 5.6, 3.1, and 4.1 units. 22367069 2012
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE Muscle color and marbling were affected by CAPN1 316 and E2FB and Warner-Bratzler meat tenderness by the former. 22818350 2012
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 GeneticVariation phenotype BEFREE Two favorable CAST alleles increased tenderness ratings of AT-striploin, TS-striploin, rump, and oyster blade steaks by, respectively, 6.1, 4.2, 4.2, and 3.1 units, and overall liking by 4.7, 2.8, 2.9, 3.7 (all P < 0.04). 22367069 2012
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.100 Biomarker phenotype BEFREE The eight SNP, which were located within five genes: mu-calpain (CAPN1), calpastatin (CAST), leptin (LEP), growth hormone receptor (GHR) and acylCoA:diacylglycerol acyltransferase 1 (DGAT1), are included in various commercial tests for tenderness, fatness, carcass composition and milk yield/quality. 19555501 2009
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 Biomarker phenotype BEFREE The eight SNP, which were located within five genes: mu-calpain (CAPN1), calpastatin (CAST), leptin (LEP), growth hormone receptor (GHR) and acylCoA:diacylglycerol acyltransferase 1 (DGAT1), are included in various commercial tests for tenderness, fatness, carcass composition and milk yield/quality. 19555501 2009
Entrez Id: 831
Gene Symbol: CAST
CAST
0.100 AlteredExpression phenotype BEFREE Younger slaughter age and lower calpastatin activity both resulted in greater tenderness (P < .05). 8707712 1996
Entrez Id: 3952
Gene Symbol: LEP
LEP
0.040 GeneticVariation phenotype BEFREE Single nucleotide polymorphisms (SNPs) carried in calpain (CAPN1), calpastatin (CAST), and leptin (LEP) genes are associated with meat tenderness. 28525658 2017
Entrez Id: 3952
Gene Symbol: LEP
LEP
0.040 GeneticVariation phenotype BEFREE A significant association and allelic substitution effect were observed for markers UoG-CAST, LEP: g.73C>T and SCD1: g.878T>C on different descriptors evaluated by a consumer panel (tenderness and overall acceptability). 25935847 2015
Entrez Id: 3952
Gene Symbol: LEP
LEP
0.040 Biomarker phenotype BEFREE Muscle color and marbling were affected by CAPN1 316 and E2FB and Warner-Bratzler meat tenderness by the former. 22818350 2012