Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 324
Gene Symbol: APC
APC
0.010 Biomarker disease BEFREE APC may reduce the inflammatory responses in NE and may ameliorate multi-organ dysfunction. 25204207 2015
Entrez Id: 1386
Gene Symbol: ATF2
ATF2
0.010 GeneticVariation disease BEFREE A neonatal encephalopathy with seizures in standard poodle dogs with a missense mutation in the canine ortholog of ATF2. 18074159 2008
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.010 GeneticVariation disease BEFREE We investigated a group of 30 female patients with a clinically heterogeneous phenotype ranging from nonspecific intellectual disability to a severe neonatal encephalopathy and identified two heterozygous CDKL5 missense mutations, the previously reported p.Val999Met and the novel mutation p.Pro944Thr. 23756444 2014
Entrez Id: 81570
Gene Symbol: CLPB
CLPB
0.010 GeneticVariation disease BEFREE Altogether, our study suggests that disruption of CLPB causes a novel form of neonatal encephalopathy associated with 3-methylglutaconic aciduria. 25650066 2015
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.010 Biomarker disease BEFREE Serum and CSF biomarkers associated with hypoxia (VEGF, Epo) were serially measured using multiplex immunoassays over days 1-4 in term infants exposed to PA including infants with NE and controls. 27902983 2017
Entrez Id: 8450
Gene Symbol: CUL4B
CUL4B
0.010 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 2056
Gene Symbol: EPO
EPO
0.020 Biomarker disease BEFREE In the context of a phase II multi-center trial evaluating erythropoietin for neuroprotection in neonatal encephalopathy (NE), DBS were collected at enrollment ( < 24 h), day 2, 4, and 5. 30661082 2019
Entrez Id: 2056
Gene Symbol: EPO
EPO
0.020 Biomarker disease BEFREE Serum and CSF biomarkers associated with hypoxia (VEGF, Epo) were serially measured using multiplex immunoassays over days 1-4 in term infants exposed to PA including infants with NE and controls. 27902983 2017
Entrez Id: 2153
Gene Symbol: F5
F5
0.010 GeneticVariation disease BEFREE In 118 infants with clinical signs of NE following perinatal HI, thrombophilic factors, such as factor V Leiden and prothrombin gene mutation, C677T and A1298C polymorphisms in the methylenetetrahydrofolate reductase (MTHFR) gene, and plasma levels of homocysteine and lipoprotein(a), were prospectively investigated. 23128422 2013
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.010 Biomarker disease BEFREE UmA GFAP is derived from the fetus, and circulating levels, which are modulated by placental clearance, increase during uncomplicated labor and more so in the presence of fetal hypoxia-asphyxia+NE, providing a better biomarker than UCH-L1 for hypoxia-asphyxia+NE. 31132788 2019
Entrez Id: 2744
Gene Symbol: GLS
GLS
0.010 GeneticVariation disease BEFREE Loss-of-function mutations in glutaminase (GLS), the enzyme converting glutamine into glutamate, and the counteracting enzyme glutamine synthetase (GS) cause disturbed glutamate homeostasis and severe neonatal encephalopathy. 30239721 2019
Entrez Id: 2752
Gene Symbol: GLUL
GLUL
0.010 GeneticVariation disease BEFREE Loss-of-function mutations in glutaminase (GLS), the enzyme converting glutamine into glutamate, and the counteracting enzyme glutamine synthetase (GS) cause disturbed glutamate homeostasis and severe neonatal encephalopathy. 30239721 2019
Entrez Id: 2775
Gene Symbol: GNAO1
GNAO1
0.010 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.010 Biomarker disease BEFREE This study focuses on the effect of hypothermia on interleukin-1 receptor antagonist pharmacodynamics in a model of neonatal encephalopathy. 30060742 2018
Entrez Id: 3684
Gene Symbol: ITGAM
ITGAM
0.010 AlteredExpression disease BEFREE Neutrophil and monocyte CD11b expression was increased significantly on day 1 in infants with NE compared to neonatal controls. 25204207 2015
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.020 GeneticVariation disease BEFREE Heterozygous KCNQ2 R201C and R201H gain-of-function variants present with profound neonatal encephalopathy in the absence of neonatal seizures. 28139826 2017
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.020 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 3918
Gene Symbol: LAMC2
LAMC2
0.010 Biomarker disease BEFREE Serum and CSF biomarkers associated with hypoxia (VEGF, Epo) were serially measured using multiplex immunoassays over days 1-4 in term infants exposed to PA including infants with NE and controls. 27902983 2017
Entrez Id: 11019
Gene Symbol: LIAS
LIAS
0.010 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 387787
Gene Symbol: LIPT2
LIPT2
0.010 GeneticVariation disease BEFREE We report on the identification of biallelic LIPT2 mutations in three affected individuals from two families with severe neonatal encephalopathy. 28757203 2017
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.100 Biomarker disease BEFREE Methyl-CpG binding protein 2 gene (MECP2) testing is indicated for patients with numerous clinical presentations, including Rett syndrome (classic and atypical), unexplained neonatal encephalopathy, Angelman syndrome, nonspecific mental retardation, autism (females), and an X-linked family history of developmental delay. 22123427 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.100 GeneticVariation disease BEFREE In this study we present a new clinical association of severe neonatal encephalopathy (Lubs syndrome) and HSCR, in a male patient carrying a duplication at the Xq28 region which encompasses the MECP2 and L1CAM genes. 20860806 2010
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.100 GeneticVariation disease BEFREE A rare MeCP2_e1 mutation first described in a male patient with severe neonatal encephalopathy. 27090848 2016
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.100 GeneticVariation disease BEFREE Mutations in methyl-CpG-binding protein 2 (MECP2) in males can lead to various phenotypes, ranging from neonatal encephalopathy to intellectual disability. 31536832 2020
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.100 GeneticVariation disease BEFREE The unmitigated impact of mutant MECP2 can be inferred from the few males who have been born into RTT kindreds with such severe neonatal encephalopathy that they did not survive their second year. 11180222 2000