Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7345
Gene Symbol: UCHL1
UCHL1
0.010 Biomarker disease BEFREE UmA GFAP is derived from the fetus, and circulating levels, which are modulated by placental clearance, increase during uncomplicated labor and more so in the presence of fetal hypoxia-asphyxia+NE, providing a better biomarker than UCH-L1 for hypoxia-asphyxia+NE. 31132788 2019
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.010 Biomarker disease BEFREE UmA GFAP is derived from the fetus, and circulating levels, which are modulated by placental clearance, increase during uncomplicated labor and more so in the presence of fetal hypoxia-asphyxia+NE, providing a better biomarker than UCH-L1 for hypoxia-asphyxia+NE. 31132788 2019
Entrez Id: 2744
Gene Symbol: GLS
GLS
0.010 GeneticVariation disease BEFREE Loss-of-function mutations in glutaminase (GLS), the enzyme converting glutamine into glutamate, and the counteracting enzyme glutamine synthetase (GS) cause disturbed glutamate homeostasis and severe neonatal encephalopathy. 30239721 2019
Entrez Id: 6285
Gene Symbol: S100B
S100B
0.010 Biomarker disease BEFREE We enrolled 50 newborns with NE.While S100B protein, tumor necrosis factor α, interleukin (IL)1 β, IL-6, IL-8 demonstrated significant DBS-plasma correlations, Bland-Altman plots demonstrated that the methods are not interchangeable, with a 2 to 4-fold error between measurements. 30661082 2019
Entrez Id: 2752
Gene Symbol: GLUL
GLUL
0.010 GeneticVariation disease BEFREE Loss-of-function mutations in glutaminase (GLS), the enzyme converting glutamine into glutamate, and the counteracting enzyme glutamine synthetase (GS) cause disturbed glutamate homeostasis and severe neonatal encephalopathy. 30239721 2019
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.010 Biomarker disease BEFREE This study focuses on the effect of hypothermia on interleukin-1 receptor antagonist pharmacodynamics in a model of neonatal encephalopathy. 30060742 2018
Entrez Id: 11019
Gene Symbol: LIAS
LIAS
0.010 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 2775
Gene Symbol: GNAO1
GNAO1
0.010 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 6326
Gene Symbol: SCN2A
SCN2A
0.010 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 8450
Gene Symbol: CUL4B
CUL4B
0.010 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018
Entrez Id: 387787
Gene Symbol: LIPT2
LIPT2
0.010 GeneticVariation disease BEFREE We report on the identification of biallelic LIPT2 mutations in three affected individuals from two families with severe neonatal encephalopathy. 28757203 2017
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.010 Biomarker disease BEFREE Serum and CSF biomarkers associated with hypoxia (VEGF, Epo) were serially measured using multiplex immunoassays over days 1-4 in term infants exposed to PA including infants with NE and controls. 27902983 2017
Entrez Id: 3918
Gene Symbol: LAMC2
LAMC2
0.010 Biomarker disease BEFREE Serum and CSF biomarkers associated with hypoxia (VEGF, Epo) were serially measured using multiplex immunoassays over days 1-4 in term infants exposed to PA including infants with NE and controls. 27902983 2017
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.010 Biomarker disease BEFREE NOS1 was present in umbilical cord blood and increased in NE cases compared with controls. 28649562 2017
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.010 Biomarker disease BEFREE Grade II/III NE was significantly associated with elevated day 2 Epo and decreased day 1 VEGF (p < 0.05; day 2 Epo AUC = 0.74, cut-off 10.05 IU/ml). 27902983 2017
Entrez Id: 5624
Gene Symbol: PROC
PROC
0.010 Biomarker disease BEFREE LPS-induced neutrophil TLR-4 expression was increased significantly in infants with NE on days 3 and 7 and was reduced by APC. 25204207 2015
Entrez Id: 3684
Gene Symbol: ITGAM
ITGAM
0.010 AlteredExpression disease BEFREE Neutrophil and monocyte CD11b expression was increased significantly on day 1 in infants with NE compared to neonatal controls. 25204207 2015
Entrez Id: 81570
Gene Symbol: CLPB
CLPB
0.010 GeneticVariation disease BEFREE Altogether, our study suggests that disruption of CLPB causes a novel form of neonatal encephalopathy associated with 3-methylglutaconic aciduria. 25650066 2015
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.010 Biomarker disease BEFREE LPS-induced monocyte TLR-4 was increased significantly in infants with NE on day 7. 25204207 2015
Entrez Id: 324
Gene Symbol: APC
APC
0.010 Biomarker disease BEFREE APC may reduce the inflammatory responses in NE and may ameliorate multi-organ dysfunction. 25204207 2015
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.010 GeneticVariation disease BEFREE We investigated a group of 30 female patients with a clinically heterogeneous phenotype ranging from nonspecific intellectual disability to a severe neonatal encephalopathy and identified two heterozygous CDKL5 missense mutations, the previously reported p.Val999Met and the novel mutation p.Pro944Thr. 23756444 2014
Entrez Id: 2153
Gene Symbol: F5
F5
0.010 GeneticVariation disease BEFREE In 118 infants with clinical signs of NE following perinatal HI, thrombophilic factors, such as factor V Leiden and prothrombin gene mutation, C677T and A1298C polymorphisms in the methylenetetrahydrofolate reductase (MTHFR) gene, and plasma levels of homocysteine and lipoprotein(a), were prospectively investigated. 23128422 2013
Entrez Id: 1386
Gene Symbol: ATF2
ATF2
0.010 GeneticVariation disease BEFREE A neonatal encephalopathy with seizures in standard poodle dogs with a missense mutation in the canine ortholog of ATF2. 18074159 2008
Entrez Id: 2056
Gene Symbol: EPO
EPO
0.020 Biomarker disease BEFREE In the context of a phase II multi-center trial evaluating erythropoietin for neuroprotection in neonatal encephalopathy (NE), DBS were collected at enrollment ( < 24 h), day 2, 4, and 5. 30661082 2019
Entrez Id: 3785
Gene Symbol: KCNQ2
KCNQ2
0.020 GeneticVariation disease BEFREE We confirmed a genetic diagnosis in five patients (36%): epileptic encephalopathy associated with autosomal dominant de novo variants in SCN2A (p.Met1545Val), KCNQ2 (p.Asp212Tyr), and GNAO1 (p.Gly40Arg); lipoic acid synthetase deficiency due to compound heterozygous variants in LIAS (p.Ala253Pro and p.His236Gln); and encephalopathy associated with an X-linked variant in CUL4B (p.Asn211Ser).ConclusionWES is helpful at arriving genetic diagnoses in neonatal encephalopathy and/or seizures and brain damage. 28817111 2018