Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.100 Biomarker phenotype BEFREE The polymerase chain reaction (PCR) technique using consensus primers for the IgH gene was used for remission and minimal residual disease (MRD) analysis in the follow-up of childhood acute lymphoblastic leukemia (ALL) of B-cell lineage. 9836069 1998
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.100 GeneticVariation phenotype BEFREE We identified 14 of 17 IGH translocations previously detected by FISH and three confirmed translocations not detected by FISH, with the additional advantage of breakpoint identification, which can be used as a target for evaluating minimal residual disease. 27863261 2017
Entrez Id: 10320
Gene Symbol: IKZF1
IKZF1
0.100 Biomarker phenotype BEFREE Importantly, neither MRD nor WBC count predicted events in the ∆IKZF1-positive cases. 26018335 2015
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.100 Biomarker phenotype BEFREE Monitoring of the minimal residual disease load with quantitative real-time PCR can be performed for NPM1 and MLL-PTD-mutated cases. 20805748 2010
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker phenotype BEFREE We studied the CD34+CD38-CD123+ fraction in AML blasts at diagnosis, and its utility as a unique phenotype for minimal residual disease (MRD) of AML patients. 29065396 2018
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.100 GeneticVariation phenotype BEFREE NPM1 mutation-based MRD monitoring was performed by RTqPCR. 26486081 2015
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.100 AlteredExpression phenotype BEFREE We have evaluated the frequency of this newly described translocation in acute lymphoblastic leukemia (ALL), and the feasibility of minimal residual disease (MRD) monitoring by polymerase chain reaction (PCR) amplification of TEL-AML1 transcripts. 8704188 1996
Entrez Id: 862
Gene Symbol: RUNX1T1
RUNX1T1
0.100 Biomarker phenotype BEFREE Most sensitive methodology to detect MRD is molecular polymerase chain reaction (PCR) but its applicability is restricted to AML with leukemia-specific molecular targets (e.g.AML1-ETO, CBFB-MYH11, MLL, FLT-3). 22196957 2012
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.100 AlteredExpression phenotype BEFREE RQ-RT-PCR of NPM/ALK expression is a promising and rapid approach for monitoring MRD. 17320171 2008
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE The results show that TD-FISH effectively discriminates between cells with overlapping BCR and ABL signals from cells with true BCR/ABL fusion and improves the ability to quantify minimal residual disease from >23% to >1% of 500 interphase nuclei. 14697634 2004
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.100 Biomarker phenotype BEFREE Detection of minimal residual disease in NPM1-mutated acute myeloid leukemia by next-generation sequencing. 24743218 2014
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.100 AlteredExpression phenotype BEFREE However, the wild-type WT1 gene is highly expressed in leukemic blast cells of myeloid and lymphoid origin, and thus, WT1 messenger RNA provides a novel tumor marker for detection of minimal residual disease of leukemias and for monitoring disease progression of myelodysplastic syndromes. 11372729 2001
Entrez Id: 10320
Gene Symbol: IKZF1
IKZF1
0.100 GeneticVariation phenotype BEFREE Using a standardized bioinformatics algorithm, we identified kinase and cytokine receptor rearrangements in the majority of ALL patients with high burden of postinduction MRD and enrichment of IKZF1 mutation or deletion (IKZF1(del) ). 27007619 2016
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.100 GeneticVariation phenotype BEFREE To examine the prognostic significance of minimal residual disease (MRD) in t(8;21) acute myeloid leukemia (AML), 96 bone marrow samples from 26 Japanese patients in complete remission (CR) were analyzed regarding the RUNX1/MTG8 transcript using real-time reverse transcriptase polymerase chain reaction assay. 18553224 2008
Entrez Id: 613
Gene Symbol: BCR
BCR
0.100 Biomarker phenotype BEFREE There is a need to standardize PCR methodology and potential confounding factors need to be addressed before PCR can be generally applied to analysis of minimal residual disease in CML. 1640725 1992
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE A 17-year-old girl with B-cell precursor acute lymphoblastic leukemia (BCP-ALL) with persistent minimal residual disease (MRD) who underwent standard chemotherapy was found to have a BCR-ABL1-like gene expression pattern. 27860260 2017
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 Biomarker phenotype BEFREE A successful MRD detection approach requires a stable marker and for lymphoid leukemias clonal rearrangements of immunoglobulin (Ig) and T cell receptor (TCR) genes are commonly used. 11684274 2001
Entrez Id: 4629
Gene Symbol: MYH11
MYH11
0.100 AlteredExpression phenotype BEFREE The results study show that analysis of the CBFbeta/MYH11 fusion transcript by PCR seems to be a suitable method for monitoring minimal residual disease in AML patients with inv (16). 9489633 1998
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE Recently, an International Scale was proposed for standardizing BCR-ABL transcript measurements and reporting in the assessment of minimal residual disease by real-time quantitative polymerase chain reaction (RQ-PCR). 18223279 2008
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.100 Biomarker phenotype BEFREE When tested on follow-up samples from a patient with acute myeloid leukemia, targeted deep sequencing of single nucleotide variations as well as NPM1 was more sensitive than minimal residual disease quantification with multiparameter flow cytometry. 27197529 2017
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 GeneticVariation phenotype BEFREE Immunoglobulin (Ig) and T-cell receptor (TCR) gene rearrangements function as specific markers for minimal residual disease (MRD), which is one of the best predictors of outcome in childhood acute lymphoblastic leukemia (ALL). 20730889 2010
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 GeneticVariation phenotype BEFREE Our report suggests a feasible pipeline, in terms of costs and reproducibility, aimed at characterizing and quantifying the genomic BCR-ABL1 rearrangement during MRD monitoring in CML patients. 29541390 2018
Entrez Id: 862
Gene Symbol: RUNX1T1
RUNX1T1
0.100 Biomarker phenotype BEFREE Since AML1/MTG8 fusion transcripts remain detectable by RT-PCR in t(8;21) AML patients in long-term hematological remission, quantitative assessment of AML1/MTG8 transcripts is necessary for the monitoring of minimal residual disease (MRD) in these patients. 10673753 2000
Entrez Id: 5371
Gene Symbol: PML
PML
0.100 GeneticVariation phenotype BEFREE The t(15;17) breakpoint in acute promyelocytic leukemia cluster within two different sites of the myl gene: targets for the detection of minimal residual disease by the polymerase chain reaction. 1310060 1992
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.100 AlteredExpression phenotype BEFREE We asked whether minimal residual disease (MRD) determined by RUNX1/RUNX1T1 transcript levels could identify allogeneic hematopoietic stem cell transplantation (allo- HSCT) t(8;21) (q22;q22) acute myeloid leukemia patients who are at high risk for relapse, together with the impact of c-KIT mutations. 25082877 2014