Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3762
Gene Symbol: KCNJ5
KCNJ5
0.010 Biomarker phenotype BEFREE Patients with MRD at transplantation had significantly higher CIR rates than those with no MRD (56.7% vs 22.6%, <i>p</i> < .001). 30950667 2019
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.010 Biomarker phenotype BEFREE The TLR9 agonist (GNKG168) induces a unique immune activation pattern in vivo in children with minimal residual disease positive acute leukemia: Results of the TACL T2009-008 phase I study. 31530240 2019
Entrez Id: 2526
Gene Symbol: FUT4
FUT4
0.010 Biomarker phenotype BEFREE Presence of CD15 and absence of CD34 at diagnosis correlated with the high burden of MRD at the early stage of treatment. 31807115 2019
Entrez Id: 407007
Gene Symbol: MIR222
MIR222
0.010 Biomarker phenotype BEFREE MiR-128-3p and miR-222-3p in blood predict day 15 flow cytometry MRD results 7 days earlier. 31727091 2019
Entrez Id: 8831
Gene Symbol: SYNGAP1
SYNGAP1
0.010 GeneticVariation phenotype BEFREE Of 90 patients with IG/TR MRD at TP1, nine were negative and none relapsed, while 11 with MRD<5×10<sup>-4</sup> and 70 with MRD≥5×10<sup>-4</sup> had a comparable 5-year cumulative incidence of relapse of 36.4 (15.4) and 35.2 (5.9), respectively. 29079599 2018
Entrez Id: 83596
Gene Symbol: BCL2L12
BCL2L12
0.010 AlteredExpression phenotype BEFREE More importantly, BCL2L12 expression was associated with disease remission, while the reduced BCL2L12 expression was able to predict patients' poor response to BFM therapy, in terms of M2-M3 response and MRD≥0.1% on day 15. 30016275 2018
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.010 GeneticVariation phenotype BEFREE These observations suggest that ddPCR can sensitively detect the MYD88 L265P mutation in cell-free DNA and could be used as non-invasive diagnostics, but may not be applicable for monitoring minimal residual diseases in PCNSL. 29151258 2018
Entrez Id: 6299
Gene Symbol: SALL1
SALL1
0.010 Biomarker phenotype BEFREE Further studies to validate SALL1 as a potential biomarker for minimal residual disease (MRD) and to determine SALL1's role in prognostication are ongoing. 29484122 2018
Entrez Id: 28421
Gene Symbol: IGHV3-52
IGHV3-52
0.010 GeneticVariation phenotype BEFREE Minimal residual disease and immunoglobulin variable region heavy chain mutation state predicted PFS and TP53 mutation most strongly predicted OS. 29862437 2018
Entrez Id: 1789
Gene Symbol: DNMT3B
DNMT3B
0.010 AlteredExpression phenotype BEFREE In an independent validation cohort of 132 similarly treated AAML0531 clinical trial patients, greater DNMT3B expression associated with greater GWMB, worse MRD, worse RR, and worse EFS (all <i>p</i> < 0.03); also, greater GWMB associated with worse MRD (<i>p</i> = 0.004) and EFS (<i>p</i> = 0.037). 29928480 2018
Entrez Id: 1734
Gene Symbol: DIO2
DIO2
0.010 AlteredExpression phenotype BEFREE A MRD significantly increased energy expenditure (e.g. fatty acid oxidation, glycolysis, and tricarboxylic acid cycle metabolism), regulated protein homeostasis, improved gut microbiota functions, prevented thyroid dysfunction, increased plasma thyroxine and triiodothyronine levels, decreased plasma thyroid stimulating hormone levels, increased type 2 deiodinase (DIO2) activity, and up-regulated mRNA and protein expression levels of DIO2 and thyroid hormone receptor α1 in the skeletal muscle. 29978874 2018
Entrez Id: 5524
Gene Symbol: PTPA
PTPA
0.010 Biomarker phenotype BEFREE Thus, dual PP2A and BCR-ABL inhibition may be a valuable therapeutic strategy to synergistically target drug-insensitive LSCs that maintain minimal residual disease in patients. 29437150 2018
Entrez Id: 5293
Gene Symbol: PIK3CD
PIK3CD
0.010 Biomarker phenotype BEFREE This CRLF2-driven network could be more effectively disrupted by SRC/ABL inhibition than single-agent JAK or PI3K inhibition, and this could be demonstrated even in primary minimal residual disease (MRD) cells. 29796158 2018
Entrez Id: 2119
Gene Symbol: ETV5
ETV5
0.010 Biomarker phenotype BEFREE We conclude that our novel metric - ERM-D8 - based on time-series GEP after 8 days of remission-induction therapy can independently predict relapse even after adjusting for NCI risk, genetics, Day 8 peripheral blood response and MRD. 29808917 2018
Entrez Id: 7067
Gene Symbol: THRA
THRA
0.010 AlteredExpression phenotype BEFREE A MRD significantly increased energy expenditure (e.g. fatty acid oxidation, glycolysis, and tricarboxylic acid cycle metabolism), regulated protein homeostasis, improved gut microbiota functions, prevented thyroid dysfunction, increased plasma thyroxine and triiodothyronine levels, decreased plasma thyroid stimulating hormone levels, increased type 2 deiodinase (DIO2) activity, and up-regulated mRNA and protein expression levels of DIO2 and thyroid hormone receptor α1 in the skeletal muscle. 29978874 2018
Entrez Id: 5291
Gene Symbol: PIK3CB
PIK3CB
0.010 Biomarker phenotype BEFREE This CRLF2-driven network could be more effectively disrupted by SRC/ABL inhibition than single-agent JAK or PI3K inhibition, and this could be demonstrated even in primary minimal residual disease (MRD) cells. 29796158 2018
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.010 Biomarker phenotype BEFREE This CRLF2-driven network could be more effectively disrupted by SRC/ABL inhibition than single-agent JAK or PI3K inhibition, and this could be demonstrated even in primary minimal residual disease (MRD) cells. 29796158 2018
Entrez Id: 965
Gene Symbol: CD58
CD58
0.010 Biomarker phenotype BEFREE Our findings indicate that including both CD58 and CD81 markers in addition to CD19, CD34, CD20, CD38, and CD10 are helpful in MRD detection by flow cytometry. 29500862 2018
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.010 Biomarker phenotype BEFREE The median minimal residual disease (MRD) was lower in CRLF2pos than CRLF2-negative (CRLF2neg) patients on day 15 (MRD15) after induction therapy [0.01% (0.001-0.42%) vs. 0.45% (0.05-3.50%); p=0.001]. 29899835 2018
Entrez Id: 324
Gene Symbol: APC
APC
0.010 Biomarker phenotype BEFREE An electrosurgical snare was performed to resect the neoplasm and several APC were administered at the sites of the resection to provide hemostasis and further coagulate for the residual neoplasm. 30334948 2018
Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
0.010 Biomarker phenotype BEFREE This CRLF2-driven network could be more effectively disrupted by SRC/ABL inhibition than single-agent JAK or PI3K inhibition, and this could be demonstrated even in primary minimal residual disease (MRD) cells. 29796158 2018
Entrez Id: 942
Gene Symbol: CD86
CD86
0.010 Biomarker phenotype BEFREE CD73 and CD86 are the most relevant markers to incorporate in the routine MRD evaluation of BCPALL. 27718302 2018
Entrez Id: 147495
Gene Symbol: APCDD1
APCDD1
0.010 Biomarker phenotype BEFREE It will then provide a current summary of the applications of HTS-IR technology in the diagnosis and monitoring of minimal residual disease (MRD), focusing on immune reconstitution after the treatment of allogeneic hematopoietic stem cell transplantation (allo-HSCT) in B/T-cell malignancies, and the precise detection of tumor-infiltrating lymphocytes (TILs) in non-B/T-cell malignancies. 29247824 2018
Entrez Id: 51270
Gene Symbol: TFDP3
TFDP3
0.010 Biomarker phenotype BEFREE Collectively, TFDP3 confers chemoresistance in MRD within childhood T-ALL, indicating that TFDP3 is a potential gene therapy target for residual cancer. 27902457 2017
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.010 Biomarker phenotype BEFREE <sup>18</sup>F-FDG PET/CT can be coupled with sensitive bone marrow-based techniques to detect minimal residual disease (MRD) inside and outside the bone marrow, helping to identify those patients who are defined as having imaging MRD negativity. 28368259 2017