Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.100 Biomarker phenotype BEFREE We retrospectively analyzed the 5mC content of 42 patients with intestinal metaplasia (a precancerous lesion of GC) treated with a COX-2 specific inhibitor Rofecoxib or placebo for 2 years, revealing that the COX-2 inhibitor significantly down-regulated 5mC levels (N=42, P=0.009). 31534549 2019
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE Concerning about the origin of p63/p40 and CDX2, it was suggested that the tumor cells were not derived from ectopic squamous epithelium but from intestinal metaplasia. 30890174 2019
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE Previous studies indicated that SOX2, the key transcription factor in gastric differentiation, was downregulated during IM development while CDX2, the pivotal intestine-specific transcription factor was upregulated significantly. 30733645 2019
Entrez Id: 1044
Gene Symbol: CDX1
CDX1
0.100 AlteredExpression phenotype BEFREE Intestinal-type gastric cancer often results from <i>Helicobacter pylori</i> infection through intestinal metaplasia, a transdifferentiated premalignant phenotype.Because <i>H. pylori</i> virulence factor CagA has been associated with aberrant expression of the transcription factor CDX1, which regulates intestinal differentiation, we explored its relationship with <i>H. pylori</i> infection and function during gastric carcinogenesis in normal gastric epithelial cells and gastric cancer cell lines. 31416838 2019
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE Conversely, of the 47 patients initially negative for CDX-2, 8 (17.9%) developed goblet cell IM after 24 months and only 11 (23.8%) after 40 to 45 months (P = .049; age-adjusted Cox proportional hazard regression model). 31691172 2019
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE SATB2 in combination with CDX2 and CK20 differentiates sinonasal ITAC from non-ITAC with increased diagnostic sensitivity and specificity and detects IM in the sinonasal tract more easily. 27258560 2018
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.100 GeneticVariation phenotype BEFREE The COX-2 1195 G-carrier genotype was also significantly (p = 0.038) associated with the score of endoscopic intestinal metaplasia based on Kyoto classification. 28946145 2017
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.100 Biomarker phenotype BEFREE Morphological changes, mRNA, and protein expression levels for the inflammatory marker cyclooxygenase-2; the lineage-determining transcription factors TAp63 (squamous), CDX2, and SOX9 (both columnar); and the columnar lineage markers Villin, Muc-2, CK8, and mAb Das-1 (incomplete phenotype of intestinal metaplasia) were assessed every 10 wk. 28336546 2017
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE It can be speculated that either CDX2 positive morula formation or intestinal metaplasia of the endometrium as rare conditions might be the origin of carcinogenesis for this type II endometrial cancer. 28494767 2017
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE Morphological changes, mRNA, and protein expression levels for the inflammatory marker cyclooxygenase-2; the lineage-determining transcription factors TAp63 (squamous), CDX2, and SOX9 (both columnar); and the columnar lineage markers Villin, Muc-2, CK8, and mAb Das-1 (incomplete phenotype of intestinal metaplasia) were assessed every 10 wk. 28336546 2017
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 AlteredExpression phenotype BEFREE HpSlyD inducing CDX2 and VIL1 expression mediated through TCTP protein may contribute to intestinal metaplasia in the stomach. 28536478 2017
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.100 AlteredExpression phenotype BEFREE Morphological changes, mRNA, and protein expression levels for the inflammatory marker cyclooxygenase-2; the lineage-determining transcription factors TAp63 (squamous), CDX2, and SOX9 (both columnar); and the columnar lineage markers Villin, Muc-2, CK8, and mAb Das-1 (incomplete phenotype of intestinal metaplasia) were assessed every 10 wk. 28336546 2017
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE CDX2 is a crucial factor in the development of pre-cancerous lesions such as Barrett's esophagus or intestinal metaplasia in the stomach, and its tumor suppressive role has been investigated in colorectal cancers. 27729732 2016
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 AlteredExpression phenotype BEFREE These data suggest that NKX6.3 might function as a master regulator of gastric differentiation by affecting SOX2 and CDX2 expression and the NKX6.3 inactivation may result in intestinal metaplasia in gastric epithelial cells. 26743476 2016
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 AlteredExpression phenotype BEFREE In vivo, prolonged infection of NOD1-deficient mice with H. pylori led to increased Cdx2 expression and intestinal metaplasia. 26759244 2016
Entrez Id: 1044
Gene Symbol: CDX1
CDX1
0.100 Biomarker phenotype BEFREE ISX expression induced by H. pylori infection may lead to IM and hyperproliferation of gastric mucosa through CDX1/2 and cyclinD1 expression, contributing to gastric carcinogenesis. 26872890 2016
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.100 AlteredExpression phenotype BEFREE Some nuclear expressions of MUC2 and MUC6 were noted in children without intestinal metaplasia. 25704078 2015
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.100 GeneticVariation phenotype BEFREE No significant association between COX-2 methylation and risk of progression to GC was found in subjects with IM (OR, 0.50; 95% CI: 0.18-1.42) or DYS (OR, 0.70; 95% CI: 0.23-2.18). 26674784 2015
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 PosttranslationalModification phenotype BEFREE CDX2 homeoprotein is involved in the regulation of ST6GalNAc-I gene in intestinal metaplasia. 25867765 2015
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE We previously generated Cdx2-transgenic mice as model mice for intestinal metaplasia and gastric carcinoma. 25228975 2014
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression phenotype BEFREE Further, we identified increased protein expression of Mdm2/x, both powerful regulators of p53, in 100% of the IM+GC cohort with these samples also exhibiting high levels of wild-type p53 protein. 25427447 2014
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 PosttranslationalModification phenotype BEFREE Methylation of the Cdx2 promoter was not observed in intestinal metaplasia, while hypermethylation of part of its promoter was observed in hot dipped and IMC. 23382633 2013
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker phenotype BEFREE Expression of CDX1 and CDX2 was higher in the presence of intestinal metaplasia. 23613102 2013
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.100 AlteredExpression phenotype BEFREE Even in the patients without IM regression, the mean IM scores and COX-2 expressions were significantly more decreased in the celecoxib group than in the controls (p < .005). 23067366 2013
Entrez Id: 1044
Gene Symbol: CDX1
CDX1
0.100 AlteredExpression phenotype BEFREE Expression of CDX1 and CDX2 was higher in the presence of intestinal metaplasia. 23613102 2013