Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4283
Gene Symbol: CXCL9
CXCL9
0.010 Biomarker disease BEFREE Here, we aimed to elucidate the prognostic and biological implications of CXCL9 in iCCA. 31799781 2020
Entrez Id: 56667
Gene Symbol: MUC13
MUC13
0.010 AlteredExpression disease BEFREE MUC13 overexpression positively correlated with clinicopathological characteristics of iCCA, such as vascular invasion and lymph node metastasis, and was independently associated with poor survival. 31837357 2020
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.010 Biomarker disease BEFREE A positive correlation between plasma taurocholic acid and IL-4 was observed in patients with ICC. 31298745 2020
Entrez Id: 10000
Gene Symbol: AKT3
AKT3
0.010 AlteredExpression disease BEFREE M2-polarized tumor-associated macrophages promote epithelial-mesenchymal transition via activation of the AKT3/PRAS40 signaling pathway in intrahepatic cholangiocarcinoma. 31692069 2020
Entrez Id: 120892
Gene Symbol: LRRK2
LRRK2
0.010 Biomarker disease BEFREE The mechanism of LRRK2 in ICC development was also investigated in vitro. 31489563 2020
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.010 PosttranslationalModification disease BEFREE The cell-proliferation assay and colony-formation assay were applied to evaluate proliferation ability, while methylation-specific PCR were used to detect the methylation status of the MGMT promoter CpG island in ICC tissues and cells. 31264147 2020
Entrez Id: 2201
Gene Symbol: FBN2
FBN2
0.010 Biomarker disease BEFREE Our study aimed to investigate the clinicopathological and radiological features of cHCC-CCA and compare their outcomes with hepatocellular carcinoma (HCC) and intrahepatic cholangiocarcinoma (ICC). 30876788 2020
Entrez Id: 5075
Gene Symbol: PAX1
PAX1
0.010 PosttranslationalModification disease BEFREE ICC-specific PAX1 promoter methylation involved distinct CpG sites in Uyghur and Han patients HPV16 infection in HSIL and ICC patient was significantly higher than in normal women (p < 0.05). 31589957 2020
Entrez Id: 7076
Gene Symbol: TIMP1
TIMP1
0.010 Biomarker disease BEFREE Mechanistically, we found that the phosphatidylinositol 3-kinase-AKT signal pathway and its downstream effectors, such as tissue inhibitor of metalloproteinases 1 and matrix metallopeptidase 9, were required for MUC13-mediated tumor metastasis of iCCA. 31837357 2020
Entrez Id: 5315
Gene Symbol: PKM
PKM
0.010 Biomarker disease BEFREE Thus, PKM2 might be a potential independent prognostic factor for ICC. 31303531 2020
Entrez Id: 2108
Gene Symbol: ETFA
ETFA
0.010 Biomarker disease BEFREE CK19 and EMA were positive in all cases; both luminal and cytoplasmic EMA was seen in 3/5 cholangiolocellular carcinoma and 3/6 intrahepatic cholangiocarcinomas. 31186529 2019
Entrez Id: 22882
Gene Symbol: ZHX2
ZHX2
0.010 GeneticVariation disease BEFREE In a subset analysis, TP53 and RAS/RAF mutations were consistently related to poorer outcome in HBV- and non-HBV-related iCCA, respectively. 30480811 2019
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.010 Biomarker disease BEFREE Our study support the high expression of Oct4 and Nanog in ICC implies aggressive tumor behaviors and suggest a poor clinical prognosis, which emerges as valuable biomarkers for identifying patients at high risk after curative resection. 30854141 2019
Entrez Id: 8076
Gene Symbol: MFAP5
MFAP5
0.010 Biomarker disease BEFREE RNA-seq and ATAC-seq analyses were used to dissect the molecular mechanism by which MFAP5 promoted ICC aggressiveness. 31775892 2019
Entrez Id: 5133
Gene Symbol: PDCD1
PDCD1
0.010 Biomarker disease BEFREE This study provided the first set of evidence for the effectiveness of SBRT and PD-1 blockade combined therapy in late-stage or recurrent ICC patients with low TMB, MSS, pMMR and negative PD-L1 expression, and potentially expanded the indications of the combined therapy to those patients who were previously not suitable for immunotherapy. 31383016 2019
Entrez Id: 3081
Gene Symbol: HGD
HGD
0.010 Biomarker disease BEFREE By comparing the predictive performance of radiomics signatures developed by 2D and 3D image features, we observed better prediction performance in radiomics signatures based on 3D image features than those based on 2D image features for patients with ICC and HGO. 31561245 2019
Entrez Id: 5894
Gene Symbol: RAF1
RAF1
0.010 GeneticVariation disease BEFREE In a subset analysis, TP53 and RAS/RAF mutations were consistently related to poorer outcome in HBV- and non-HBV-related iCCA, respectively. 30480811 2019
Entrez Id: 1019
Gene Symbol: CDK4
CDK4
0.010 Biomarker disease BEFREE Thus, combination of CDK4/6 and mTOR inhibitors might represent a novel, promising, and effective therapeutic approach against human ICC.<i>See related commentary by Malumbres, p. 6</i>. 30084835 2019
Entrez Id: 51208
Gene Symbol: CLDN18
CLDN18
0.010 AlteredExpression disease BEFREE EVI1-positive ICC was likely to express stomach-specific claudin CLDN18 (correlation coefficient r = 0.55373) and mucin MUC5AC (r = 0.42718). 30349952 2019
Entrez Id: 2122
Gene Symbol: MECOM
MECOM
0.010 Biomarker disease BEFREE EVI1-positive ICC was likely to express stomach-specific claudin CLDN18 (correlation coefficient r = 0.55373) and mucin MUC5AC (r = 0.42718). 30349952 2019
Entrez Id: 2744
Gene Symbol: GLS
GLS
0.010 AlteredExpression disease BEFREE The results revealed that GLS1 was overexpressed in different digestive system tumors, including ICC, and that GLS1 expression in ICC tissue was higher than that in peritumoral tissue. 31257527 2019
Entrez Id: 9223
Gene Symbol: MAGI1
MAGI1
0.010 GeneticVariation disease BEFREE Mutations in PBRM-1 and BAP-1 genes, and the expression of S100P have been related to survival in ICC. miR-31 seems also to play important regulatory functions in ICC and it directly regulates BAP-1 expression in lung cancer. 30377796 2019
Entrez Id: 2048
Gene Symbol: EPHB2
EPHB2
0.010 AlteredExpression disease BEFREE HOXB7 upregulated MMP2, MMP9, VEGFa, and IL8 expression via the ERK pathway to accelerate the malignant progression of ICC. 30664713 2019
Entrez Id: 885
Gene Symbol: CCK
CCK
0.010 Biomarker disease BEFREE Cell Counting Kit-8 (CCK-8) and colony formation assays were employed to assess ICC cell proliferation, and Transwell assays were performed to estimate the invasion and migration abilities of ICC cells. 30664713 2019
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.010 Biomarker disease BEFREE EVI1-positive ICC was likely to express stomach-specific claudin CLDN18 (correlation coefficient r = 0.55373) and mucin MUC5AC (r = 0.42718). 30349952 2019