Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.600 Biomarker disease MGD
Entrez Id: 2324
Gene Symbol: FLT4
FLT4
0.010 AlteredExpression disease BEFREE <b>Conclusions:</b> Our study reveals that VEGFR-3 positive expression in tumors represents an independent prognostic factor for both overall and recurrence-free survival in hepatic resected patients with iCCA. 30123080 2018
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.600 Biomarker disease BEFREE <i>KRAS/NRAS</i> mutations are common in ICC tumours and 6-32% of patients also have isocitrate dehydrogenase 1 and 2 (<i>IDH1</i> and <i>IDH2</i>) gene mutations associated with metabolic changes. 31795195 2019
Entrez Id: 213
Gene Symbol: ALB
ALB
0.100 AlteredExpression disease BEFREE 35/47 (74.4%) ICCs expressed albumin with 35/37 (94.6%) being of SD subtype, 2/3 (66.6%) of the IND subtype and 1/7 (14.2%) of the LD subtype, P<0.003. 31834956 2019
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.600 Biomarker disease CTD_mouse Intrahepatic cholangiocarcinoma (CCA) is a lethal malignancy of the biliary epithelium associated with p53 mutations, bile duct injury, inflammation, and fibrosis. 16818635 2006
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.400 GeneticVariation disease BEFREE Intrahepatic cholangiocarcinomas with chronic advanced liver disease showed higher EGFR mutation rate (5/38, 13.2% vs 1/43, 2.3%) and lower mutation rates of KRAS (3/38, 7.9% vs 8/43, 18.6%), MLH1 (2/38, 5.3% vs 5/43, 11.6%), and GNAS (1/38, 2.6% vs 5/43, 11.6%), compared with those in intrahepatic cholangiocarcinomas with normal liver. 24186137 2014
Entrez Id: 5774
Gene Symbol: PTPN3
PTPN3
0.030 GeneticVariation disease BEFREE ICC-associated variants of PTPN3 altered phosphatase activity. 24503127 2014
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.400 GeneticVariation disease BEFREE ICC cases (n=3) showed IDH1 (33.3%) and NRAS (33.3%) mutations. 26189129 2015
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.020 GeneticVariation disease BEFREE ICC cases (n=3) showed IDH1 (33.3%) and NRAS (33.3%) mutations. 26189129 2015
Entrez Id: 8495
Gene Symbol: PPFIBP2
PPFIBP2
0.010 Biomarker disease BEFREE ICC cell lines (CCLP-1, RBE, and HCCC-9810) were treated with metformin and/or ATO; the anti-proliferation effect was evaluated by cell viability, cell apoptosis, cell cycle, and intracellular-reactive oxygen species (ROS) assays. 28241849 2017
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.400 GeneticVariation disease BEFREE Intrahepatic cholangiocarcinomas are most likely to harbor mutations in isocitrate dehydrogenase genes (IDH1, IDH2), fibroblast growth factor receptors (FGFR1, FGFR2, FGFR3), Eph receptor 2 (EPHA2), and BAP1 (gene involved in chromatin remodeling) genes, whereas ARID1B, ELF3, PBRM1, cAMP dependent protein kinase (PRKACA, and PRKACB) genetic mutations were implicated more commonly in distal and perihilar subtypes. 31255945 2019
Entrez Id: 5567
Gene Symbol: PRKACB
PRKACB
0.310 GeneticVariation disease BEFREE Intrahepatic cholangiocarcinomas are most likely to harbor mutations in isocitrate dehydrogenase genes (IDH1, IDH2), fibroblast growth factor receptors (FGFR1, FGFR2, FGFR3), Eph receptor 2 (EPHA2), and BAP1 (gene involved in chromatin remodeling) genes, whereas ARID1B, ELF3, PBRM1, cAMP dependent protein kinase (PRKACA, and PRKACB) genetic mutations were implicated more commonly in distal and perihilar subtypes. 31255945 2019
Entrez Id: 5075
Gene Symbol: PAX1
PAX1
0.010 PosttranslationalModification disease BEFREE ICC-specific PAX1 promoter methylation involved distinct CpG sites in Uyghur and Han patients HPV16 infection in HSIL and ICC patient was significantly higher than in normal women (p < 0.05). 31589957 2020
Entrez Id: 4582
Gene Symbol: MUC1
MUC1
0.050 AlteredExpression disease BEFREE MUC1 is overexpressed in liver fluke-associated cholangiocarcinoma and relates to vascular invasion and poor prognosis, whereas MUC5AC mucin is neoexpressed and relates to neural invasion and advanced ICC stage. 16124042 2005
Entrez Id: 4680
Gene Symbol: CEACAM6
CEACAM6
0.010 AlteredExpression disease BEFREE CEACAM6 expression status was determined and analysed with respect to various clinicopathological parameters in 23 intrahepatic cholangiocarcinomas. 16868542 2006
Entrez Id: 5465
Gene Symbol: PPARA
PPARA
0.010 AlteredExpression disease BEFREE PPAR( expression in HuH-28 and HuCCT1 cells (intrahepatic bile duct carcinoma) was determined using the reverse transcription-polymerase chain reaction (RT-PCR). 16927143 2006
Entrez Id: 2778
Gene Symbol: GNAS
GNAS
0.330 GeneticVariation disease BEFREE GNAS1 T393C is a novel independent host factor for disease progression in patients with ICC. 17356712 2007
Entrez Id: 999
Gene Symbol: CDH1
CDH1
0.020 Biomarker disease BEFREE CDH1 and NEUROG1 were more frequently methylated in extrahepatic cholangiocarcinoma than in intrahepatic cholangiocarcinoma, whereas CHFR, GSTP1, IGF2, MGMT, MINT31, p14, and RBP1 were more frequently methylated in intrahepatic cholangiocarcinoma: the differences was statistically significant (P < .05). 17550320 2007
Entrez Id: 648
Gene Symbol: BMI1
BMI1
0.010 AlteredExpression disease BEFREE Bmi1 was consistently expressed in nonneoplastic biliary epithelial cells and in all intrahepatic cholangiocarcinoma, irrespective of the location and histological degree of differentiation. 19695678 2009
Entrez Id: 174
Gene Symbol: AFP
AFP
0.080 AlteredExpression disease BEFREE AFP and Notch1 expression was observed in clinical intrahepatic cholangiocarcinomas. 20149523 2010
Entrez Id: 55065
Gene Symbol: SLC52A1
SLC52A1
0.010 AlteredExpression disease BEFREE PAR-2 mRNA and protein were observed in ICC cell lines. 20198321 2010
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
0.010 AlteredExpression disease BEFREE PAR-2 mRNA and protein were observed in ICC cell lines. 20198321 2010
Entrez Id: 2150
Gene Symbol: F2RL1
F2RL1
0.010 AlteredExpression disease BEFREE PAR-2 mRNA and protein were observed in ICC cell lines. 20198321 2010
Entrez Id: 3107
Gene Symbol: HLA-C
HLA-C
0.010 GeneticVariation disease BEFREE HLA-Cw group 1 (HLA-Cw alleles with asparagine at position 80), which serves as ligand for certain killer immunoglobulin-like receptors (KIR), was significantly overtransmitted in women with ICC (P = 0.04), and particularly in the subgroup of women infected with high risk HPV16 or 18 subtypes (P = 0.008). 20857097 2010
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.400 Biomarker disease BEFREE EGFR and L1CAM may be important targets for ICC therapy. 22088438 2012