Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.100 AlteredExpression group BEFREE : intraperitoneally; Ka: kaempferol; KD: knockdown; KO: knockout; LPS: lipopolysaccharide; IL1B: interleukin 1 beta; IL6: interleukin 6; Ly: lysate; MAP1LC3B/LC3B: microtubule-associated protein 1 light chain 3 beta; MPTP: 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine; NC: negative control; NDD: neurodegenerative diseases; NLRP3: NLR family, pyrin domain containing 3; OE: overexpression; PD: Parkinson disease; poly-Ub: poly-ubiquitin; PTM: post-translational modification; PYCARD/ASC: PYD and CARD domain containing; Rapa: rapamycin; RFP: red fluorescent protein; SN: supernatant; SNCA: synuclein alpha; SNpc: substantia nigra pars compacta; SQSTM1: sequestosome 1; TH: tyrosine hydroxylase; TNF/TNF-alpha: tumor necrosis factor; Ub: ubiquitin; WT: wild type. 30966861 2019
Entrez Id: 4137
Gene Symbol: MAPT
MAPT
0.400 Biomarker group BEFREE Neurodegenerative disorders referred to as tauopathies have cellular hyperphosphorylated tau protein aggregates in the absence of amyloid deposits. 10517507 1999
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE Neurodegenerative diseases classified as synucleinopathies are characterized by alpha-synuclein inclusions. 15581183 2004
Entrez Id: 6620
Gene Symbol: SNCB
SNCB
0.100 Biomarker group BEFREE Neurodegenerative diseases are often classified based on the abnormal accumulation of synuclein or tau. 16489609 2006
Entrez Id: 6623
Gene Symbol: SNCG
SNCG
0.100 Biomarker group BEFREE Neurodegenerative diseases are often classified based on the abnormal accumulation of synuclein or tau. 16489609 2006
Entrez Id: 23435
Gene Symbol: TARDBP
TARDBP
0.100 Biomarker group BEFREE Neurodegenerative disorders characterized by neuronal and glial lesions containing aggregated pathological TDP-43 protein in the cytoplasm, nucleus, or neurites are collectively referred to as TDP-43 proteinopathies. 21123567 2010
Entrez Id: 6647
Gene Symbol: SOD1
SOD1
0.100 Biomarker group BEFREE Neurodegenerative diseases are associated with accumulation of modified proteins or peptides including amyloid-β (Aβ) in Alzheimer's disease (AD), and misfolded superoxide dismutase-1 (SOD-1) in amyotrophic lateral sclerosis (ALS). 22156608 2012
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE Neurodegenerative disorders such as Parkinson's Disease (PD), PD dementia (PDD) and Dementia with Lewy bodies (DLB) are characterized by progressive accumulation of α-synuclein (α-syn) in neurons. 28086964 2017
Entrez Id: 23435
Gene Symbol: TARDBP
TARDBP
0.100 GeneticVariation group BEFREE Neurodegenerative diseases-causing TDP-43 mutations affected tau mRNA instability differentially, in that some promoted and others did not significantly affect tau mRNA instability. 28335005 2017
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE Neurodegenerative disorders (NDs) are characterized by abnormal accumulation/misfolding of specific proteins, primarily α-synuclein (α-syn), β-amyloid<sub>1-42</sub> (Aβ), and tau, in both brain and peripheral tissue. 28421539 2018
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE Neurodegenerative disorders (NDs) are characterized by abnormal accumulation/misfolding of specific proteins, primarily α-synuclein (α-syn), β-amyloid<sub>1-42</sub> (Aβ<sub>1-42</sub>) and tau, in both brain and peripheral tissues. 29520218 2018
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE Neurodegenerative disorders of the aging population are characterized by progressive accumulation of neuronal proteins such as α-synuclein (α-syn) in Parkinson's Disease (PD) and Amyloid ß (Aß) and Tau in Alzheimer's disease (AD) for which no treatments are currently available. 30849508 2019
Entrez Id: 4137
Gene Symbol: MAPT
MAPT
0.400 Biomarker group BEFREE Neurodegenerative diseases such as Alzheimer's disease are characterized by the progressive spreading and accumulation of hyper-phosphorylated tau protein in the brain. 30874605 2019
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.070 GeneticVariation group BEFREE Neurodegenerative Disease Caregivers' 5-HTTLPR Genotype Moderates the Effect of Patients' Empathic Accuracy Deficits on Caregivers' Well-Being. 31133468 2019
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE alpha-Synuclein is a soluble presynaptic protein which is pathologically redistributed within intracellular lesions characteristic of several neurodegenerative diseases. 10075647 1999
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.100 Biomarker group BEFREE JNCL is a neurodegenerative disease of childhood caused by mutations in the CLN3 gene. 10191119 1999
Entrez Id: 6687
Gene Symbol: SPG7
SPG7
0.010 Biomarker group BEFREE SPG7 is a newly identified gene involved in an autosomal recessive form of hereditary spastic paraplegia (HSP), a genetically heterogeneous group of neurodegenerative disorders. 10480368 1999
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE Alpha synuclein has been specifically implicated in neurodegenerative disease. 10491577 1999
Entrez Id: 351
Gene Symbol: APP
APP
0.400 Biomarker group BEFREE Amyloid precursor protein gene isoforms in Alzheimer's disease and other neurodegenerative disorders. 10675649 2000
Entrez Id: 6314
Gene Symbol: ATXN7
ATXN7
0.100 Biomarker group BEFREE SCA 7 is a rare distinct neurodegenerative disorder characterized by trinucleotide expansion. 10705940 2000
Entrez Id: 10730
Gene Symbol: YME1L1
YME1L1
0.020 Biomarker group BEFREE YME1L1 may represent a candidate gene for other forms of hereditary spastic paraplegia and possibly for other neurodegenerative disorders. 10843804 2000
Entrez Id: 2395
Gene Symbol: FXN
FXN
0.100 Biomarker group BEFREE Frataxin deficiency is the primary cause of Friedreich ataxia (FRDA), an autosomal recessive cardiodegenerative and neurodegenerative disease. 10930361 2000
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.400 Biomarker group BEFREE alpha-Synuclein has been centrally implicated in neurodegenerative disease, and a normal function in developmental synaptic plasticity has been suggested by studies in songbirds. 10952980 2000
Entrez Id: 2668
Gene Symbol: GDNF
GDNF
0.380 Biomarker group BEFREE Glial cell line-derived neurotrophic factor (GDNF) as a defensive molecule for neurodegenerative disease: a tribute to the studies of antonia vernadakis on neuronal-glial interactions. 10978846 2000
Entrez Id: 3064
Gene Symbol: HTT
HTT
0.100 Biomarker group BEFREE Huntingtin is a 350-kilodalton protein of unknown function that is mutated in Huntington's disease (HD), a neurodegenerative disorder. 11408619 2001