Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8242
Gene Symbol: KDM5C
KDM5C
0.410 GeneticVariation disease BEFREE We describe a nondysmorphic patient with developmental delay and autism spectrum disorder who has a missense mutation in the Jumonji AT-rich interactive domain 1C (JARID1C) gene. 18203167 2008
Entrez Id: 5879
Gene Symbol: RAC1
RAC1
0.410 GeneticVariation disease BEFREE We report seven individuals with distinct de novo missense RAC1 mutations and varying degrees of developmental delay, brain malformations, and additional phenotypes. 28886345 2017
Entrez Id: 6942
Gene Symbol: TCF20
TCF20
0.410 GeneticVariation disease BEFREE Furthermore, intellectual disability/developmental delay seems to be fully penetrant amongst known individuals with de novo nonsense and frameshift variants of TCF20, whereas ASD is shown to be incompletely penetrant. 27436265 2016
Entrez Id: 23028
Gene Symbol: KDM1A
KDM1A
0.410 GeneticVariation disease BEFREE De novo variants in KDM1A underlie a new syndrome characterized by developmental delay and distinctive facial features. 26656649 2016
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.410 GeneticVariation disease BEFREE Co-administration of Tregitopes and T1D antigens delayed development of hyperglycemia and reduced the incidence of diabetes in NOD mice. 23710469 2013
Entrez Id: 5515
Gene Symbol: PPP2CA
PPP2CA
0.410 GeneticVariation disease BEFREE We now report 16 individuals with mild to profound ID and DD and a de novo mutation in PPP2CA, encoding the catalytic Cα subunit. 30595372 2019
Entrez Id: 51594
Gene Symbol: NBAS
NBAS
0.320 GeneticVariation disease BEFREE Neuroblastoma Amplified Sequence (NBAS) mutation in recurrent acute liver failure: Confirmatory report in a sibship with very early onset, osteoporosis and developmental delay. 26578240 2015
Entrez Id: 26523
Gene Symbol: AGO1
AGO1
0.320 AlteredExpression disease BEFREE However, downregulation of Argonaute 1 reduced larval survivorship and delayed development. 29891360 2018
Entrez Id: 84628
Gene Symbol: NTNG2
NTNG2
0.320 GeneticVariation disease BEFREE We identified a homozygous frameshift variant in NTNG2 (NM_032536.3: c.376dup), encoding Netrin-G2, in eight individuals from four families with global developmental delay, hypotonia, secondary microcephaly, and autistic features. 31372774 2019
Entrez Id: 58499
Gene Symbol: ZNF462
ZNF462
0.320 Biomarker disease BEFREE Haploinsufficiency of ZNF462 is associated with craniofacial anomalies, corpus callosum dysgenesis, ptosis, and developmental delay. 28513610 2017
Entrez Id: 51594
Gene Symbol: NBAS
NBAS
0.320 GeneticVariation disease BEFREE Patient 2: NBAS c.5741G>A p.(Arg1914His); c.2032C>T p.(Gln678*) in a 5-year old boy with similar presenting features, bone fragility, mild developmental delay, abnormal liver function tests and immunodeficiency. 27789416 2017
Entrez Id: 84628
Gene Symbol: NTNG2
NTNG2
0.320 GeneticVariation disease BEFREE In this study, through a combination of exome sequencing and autozygosity mapping, we have identified 16 individuals (from seven unrelated families) with ultra-rare homozygous missense variants in NTNG2; these individuals present with shared features of a neurodevelopmental disorder consisting of global developmental delay, severe to profound intellectual disability, muscle weakness and abnormal tone, autistic features, behavioral abnormalities, and variable dysmorphisms. 31668703 2019
Entrez Id: 26523
Gene Symbol: AGO1
AGO1
0.320 GeneticVariation disease BEFREE We describe five patients with hypotonia, poor feeding, and developmental delay who were found to have microdeletions of chromosomal region 1p34.3 encompassing the AGO1 and AGO3 genes. 25271087 2015
Entrez Id: 58499
Gene Symbol: ZNF462
ZNF462
0.320 Biomarker disease BEFREE By using a piggyBac transposon-generated Zfp462 knockout (KO) mouse model, we found that Zfp462 KO mice exhibited prenatal lethality with normal neural tube patterning, whereas heterozygous (Het) Zfp462 KO (Zfp462<sup>+/-</sup> ) mice showed developmental delay with low body weight and brain weight. 27621227 2017
Entrez Id: 51780
Gene Symbol: KDM3B
KDM3B
0.310 GeneticVariation disease BEFREE By using exome sequencing and a gene matching approach, we identified de novo and inherited pathogenic variants in KDM3B in 14 unrelated individuals and three affected parents with varying degrees of intellectual disability (ID) or developmental delay (DD) and short stature. 30929739 2019
Entrez Id: 28514
Gene Symbol: DLL1
DLL1
0.310 Biomarker disease BEFREE Given that Delta-like 1 (DLL1) is a ligand for the Notch receptor and that a few individuals with developmental delay, intellectual disability, and brain malformations have microdeletions encompassing DLL1, we hypothesized that insufficiency of DLL1 causes a human neurodevelopmental disorder. 31353024 2019
Entrez Id: 4953
Gene Symbol: ODC1
ODC1
0.310 GeneticVariation disease BEFREE Novel de novo pathogenic variant in the ODC1 gene in a girl with developmental delay, alopecia, and dysmorphic features. 30239107 2018
Entrez Id: 11198
Gene Symbol: SUPT16H
SUPT16H
0.310 Biomarker disease BEFREE Submicroscopic 14q11.2 deletions involving the CHD8 and SUPT16H genes have been reported in patients with developmental delay (DD)/intellectual disability (ID) or autism spectrum disorders (ASDs) and/or macrocephaly. 26834018 2016
Entrez Id: 5430
Gene Symbol: POLR2A
POLR2A
0.310 GeneticVariation disease BEFREE We conclude that subtle variants that are central in functionally important domains of POLR2A cause a neurodevelopmental syndrome characterized by profound infantile-onset hypotonia and developmental delay through a dominant-negative effect on pol-II-mediated transcription of DNA. 31353023 2019
Entrez Id: 2558
Gene Symbol: GABRA5
GABRA5
0.310 GeneticVariation disease BEFREE Using whole-genome sequencing, we identified a novel de novo missense variant in GABRA5 (c.880G > C, p.V294L) in a patient with severe early-onset epilepsy and developmental delay. 29961870 2018
Entrez Id: 11342
Gene Symbol: RNF13
RNF13
0.310 GeneticVariation disease BEFREE Three unrelated affected individuals with congenital microcephaly, infantile epileptic encephalopathy, and profound developmental delay were found to carry heterozygous variants (c.932T>C [p.Leu311Ser] or c.935T>C [p.Leu312Pro]) in RNF13, which codes for an IRE1α-interacting protein. 30595371 2019
Entrez Id: 5833
Gene Symbol: PCYT2
PCYT2
0.310 GeneticVariation disease BEFREE We identified five individuals with biallelic PCYT2 variants clinically characterized by global developmental delay with regression, spastic para- or tetraparesis, epilepsy and progressive cerebral and cerebellar atrophy. 31637422 2019
Entrez Id: 6602
Gene Symbol: SMARCD1
SMARCD1
0.310 GeneticVariation disease BEFREE Here, we report on five individuals with mutations in SMARCD1; the individuals present with developmental delay, intellectual disability, hypotonia, feeding difficulties, and small hands and feet. 30879640 2019
Entrez Id: 2741
Gene Symbol: GLRA1
GLRA1
0.310 GeneticVariation disease BEFREE Patients with GLRB and SLC6A5 mutations were more likely to have developmental delay (RR1.5 P < 0.01; RR1.9 P < 0.03) than those with GLRA1 mutations; 92% of GLRB cases reported a mild to severe delay in speech acquisition. 24030948 2013
Entrez Id: 2555
Gene Symbol: GABRA2
GABRA2
0.310 GeneticVariation disease BEFREE Patients with the GABRA2 and GABRB3 variants also presented with severe epilepsy and developmental delay. 29961870 2018