Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.630 GeneticVariation disease GWASDB Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis. 23603763 2013
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.630 GeneticVariation disease BEFREE 223 cholangiocarcinoma patients including three primary sclerosing cholangitis individuals and 355 cancer- and primary sclerosing cholangitis-free controls were genotyped for MST1 rs3197999. 23422030 2013
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.630 Biomarker disease BEFREE These results strongly implicate the role of IL-2/IL2RA pathway in PSC and provide further confirmation of MST1 association. 22554193 2012
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.630 GeneticVariation disease BEFREE Therefore, the gain of function observed with rs3197999 in MST1 might provide a cellular mechanism for the consistent association of this polymorphism with an increased risk for IBD and PSC. 22237417 2012
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.630 GeneticVariation disease GWASDB Genome-wide association analysis in primary sclerosing cholangitis identifies two non-HLA susceptibility loci. 21151127 2011
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.630 SusceptibilityMutation disease ORPHANET Genome-wide association analysis in primary sclerosing cholangitis identifies two non-HLA susceptibility loci. 21151127 2011
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.630 Biomarker disease CTD_human Genome-wide association analysis in primary sclerosing cholangitis identifies two non-HLA susceptibility loci. 21151127 2011
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 Biomarker disease BEFREE Here we investigated the functional role of gut-liver crosstalk for CLD in the murine Mdr2 knockout <i>(Mdr2<sup>-/-</sup>)</i> model resembling human primary sclerosing cholangitis (PSC). 30872395 2019
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 GeneticVariation disease BEFREE To generalize these observations, we suppressed β-catenin in Mdr2 knockout (KO) mice, which develop sclerosing cholangitis due to regurgitation of BA from leaky ducts. 31489648 2019
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 Biomarker disease BEFREE In the multidrug resistance protein 2 (Mdr2)<sup>-/-</sup> mouse model, low phospholipid bile instigates biliary epithelial injury, sterile inflammation, and fibrosis, thereby recapitulating disease mechanisms implicated in biliary atresia (BA) and primary sclerosing cholangitis. 29698570 2018
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 Biomarker disease CTD_human Galunisertib modifies the liver fibrotic composition in the Abcb4Ko mouse model. 29808285 2018
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 Biomarker disease BEFREE Mutation screening of ABCB4 was carried out in 90 patients with idiopathic chronic cholestasis (ICC), primary biliary cirrhosis (PBC), primary sclerosing cholangitis (PSC), ICP, and JC. 26324191 2016
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 Biomarker disease MGD A new Mdr2(-/-) mouse model of sclerosing cholangitis with rapid fibrosis progression, early-onset portal hypertension, and liver cancer. 25478810 2015
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 Biomarker disease MGD To study the progression of sclerosing cholangitis after inhibition of the sympathetic nervous system by blockade of the β-adrenoceptors, we used the Mdr2(-/-) mouse model, which develops periportal fibrosis similar to human PSC. 20921947 2011
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 GeneticVariation disease BEFREE Indeed, MDR3 variants could play a role as modifier gene in primary biliary cirrhosis and primary sclerosing cholangitis, but their exact role needs further clarification. 17295178 2007
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 Biomarker disease CTD_human Multidrug resistance gene 2 knockout mice (Mdr2(-/-)) represent a well-characterized model for sclerosing cholangitis. 16472600 2006
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.560 GeneticVariation disease BEFREE Although an impact of rare variants on BSEP and MDR3 function cannot be ruled out, our data do not support a strong role of BSEP and MDR3 genetic variations in the pathogenesis of PBC and PSC. 14999697 2004
Entrez Id: 53347
Gene Symbol: UBASH3A
UBASH3A
0.400 Biomarker disease CTD_human Genome-wide association study of primary sclerosing cholangitis identifies new risk loci and quantifies the genetic relationship with inflammatory bowel disease. 27992413 2017
Entrez Id: 53347
Gene Symbol: UBASH3A
UBASH3A
0.400 GeneticVariation disease GWASDB Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis. 23603763 2013
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.320 GeneticVariation disease BEFREE Genome-wide association studies have identified common variants in transcription factor 4 (TCF4) as susceptibility loci for schizophrenia, Fuchs' endothelial corneal dystrophy, and primary sclerosing cholangitis. 24594265 2014
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.320 GeneticVariation disease BEFREE We discovered novel genome-wide significant associations with PSC at 2q37 [rs3749171 at G-protein-coupled receptor 35 (GPR35); P = 3.0 × 10(-9) in the overall study population, combined odds ratio [OR] and 95% confidence interval [CI] of 1.39 (1.24-1.55)] and at 18q21 [rs1452787 at transcription factor 4 (TCF4); P = 2.61 × 10(-8) , OR (95% CI) = 0.75 (0.68-0.83)]. 22821403 2013
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.320 SusceptibilityMutation disease ORPHANET We discovered novel genome-wide significant associations with PSC at 2q37 [rs3749171 at G-protein-coupled receptor 35 (GPR35); P = 3.0 × 10(-9) in the overall study population, combined odds ratio [OR] and 95% confidence interval [CI] of 1.39 (1.24-1.55)] and at 18q21 [rs1452787 at transcription factor 4 (TCF4); P = 2.61 × 10(-8) , OR (95% CI) = 0.75 (0.68-0.83)]. 22821403 2013
Entrez Id: 10018
Gene Symbol: BCL2L11
BCL2L11
0.310 Biomarker disease BEFREE Of interest with regard to PSC is the finding that BCL2L11-deficient mice develop periductular infiltrates. 27630216 2017
Entrez Id: 2859
Gene Symbol: GPR35
GPR35
0.310 SusceptibilityMutation disease ORPHANET We discovered novel genome-wide significant associations with PSC at 2q37 [rs3749171 at G-protein-coupled receptor 35 (GPR35); P = 3.0 × 10(-9) in the overall study population, combined odds ratio [OR] and 95% confidence interval [CI] of 1.39 (1.24-1.55)] and at 18q21 [rs1452787 at transcription factor 4 (TCF4); P = 2.61 × 10(-8) , OR (95% CI) = 0.75 (0.68-0.83)]. 22821403 2013
Entrez Id: 2859
Gene Symbol: GPR35
GPR35
0.310 GeneticVariation disease BEFREE We discovered novel genome-wide significant associations with PSC at 2q37 [rs3749171 at G-protein-coupled receptor 35 (GPR35); P = 3.0 × 10(-9) in the overall study population, combined odds ratio [OR] and 95% confidence interval [CI] of 1.39 (1.24-1.55)] and at 18q21 [rs1452787 at transcription factor 4 (TCF4); P = 2.61 × 10(-8) , OR (95% CI) = 0.75 (0.68-0.83)]. 22821403 2013