Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.400 GeneticVariation disease BEFREE Current and future therapies for targeting HER2 mutations in gastrointestinal cancer. 30092682 2018
Entrez Id: 3090
Gene Symbol: HIC1
HIC1
0.310 GeneticVariation disease BEFREE Together, our data suggest that loss of a gene frequently silenced via epigenetic mechanisms, Hic1, can cooperate with loss of a gene mutated in GI cancer, Apc, to promote tumorigenesis in an in vivo model of multiple intestinal neoplasia. 21297660 2011
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE All 12 gastrointestinal cancer cell lines carried either a wild-type or mutant p53 gene. 9923540 1999
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.100 GeneticVariation disease BEFREE We surveyed the TS tandem repeat sequence and found copy number changes in gastrointestinal cancers. 17018589 2006
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE This nonradioactive method is an accurate and clinically useful way to detect hot-spot point mutations of the p53 gene in gastrointestinal cancers. 7691445 1993
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.100 GeneticVariation disease BEFREE Thymidylate synthase (TS), Dihydropyrimidine dehydrogenase (DPD) and Thymidine Phosphorylase (TP) gene expressions are reported to be predictive markers for 5-fluorouracil (5-FU) sensitivity in gastrointestinal cancer. 15890242 2005
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.100 GeneticVariation disease BEFREE The TYMS-TSER polymorphism is associated with toxicity of low-dose capecitabine in patients with advanced gastrointestinal cancer. 27557140 2016
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE Potassium diazoacetate-induced p53 mutations in vitro in relation to formation of O6-carboxymethyl- and O6-methyl-2'-deoxyguanosine DNA adducts: relevance for gastrointestinal cancer. 16926174 2007
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.100 GeneticVariation disease BEFREE Compared to the Caucasian population in America and Europe, the COX-2 -1195G>A gene polymorphism in the Asian population (A <i>vs</i> G: OR = 1.30; AA/AG <i>vs</i> GG: OR = 1.50; AA <i>vs</i> GG/AG: OR = 1.35; AA <i>vs</i> GG: OR = 1.71; AG <i>vs</i> GG: OR = 1.37) significantly increased gastrointestinal cancer risk. 28405152 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE Genetic variation in TP53 may contribute, alone or in concert with other risk factors, to modify the inherited susceptibility to pancreatic cancer, as well as to other gastrointestinal cancers. 20110284 2010
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE Present results suggest common genetic features in the susceptibility to breast and gastrointestinal cancers in respect to TP53 variations. 26226484 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE The DNA of 354 specimens of gastrointestinal cancer (esophagus 85, stomach 112, colon 157) was extracted and then p53 gene mutations were investigated by direct sequencing; the loss of heterozygosity was also synchronously analyzed in all cases. 19153488 2009
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE Together, our study provided molecular-level insights into the impacts of the carboxymethylated DNA lesions on DNA replication in human cells, revealed the roles of individual translesion synthesis DNA polymerases in bypassing these lesions, and suggested the contributions of O6-CMdG, N3-CMdT and O4-CMdT to the mutations found in p53 gene of human gastrointestinal cancers. 28531304 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE These findings suggest that STK11 is a tumor suppressor gene regulating the development of hamartomas, and that somatic mutation of p53 subsequently promotes gastrointestinal cancer at a later stage in PJS. 12051537 2002
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.100 GeneticVariation disease BEFREE Thymidylate synthase (TS) gene polymorphisms such as tandem repeat (TR) polymorphisms and single-nucleotide polymorphisms (SNPs) affect transcriptional efficiency of the TS gene and may be prognostic markers for fluoropyrimidine-based therapy in various gastrointestinal cancers. 25955097 2015
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.100 GeneticVariation disease BEFREE These results suggest a link between MTHFR genotype and the folate pool in gastrointestinal cancer, leading to the association of MTHFR genotype with TS inhibition rate upon 5-FU exposure. 11299748 2001
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE While alteration of the p53 gene is observed in various human cancers, that of the DCC gene is considered to occur more selectively in gastrointestinal cancers. 1591722 1992
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.100 GeneticVariation disease BEFREE We investigated the polymorphism on the repeat length of the TS gene and its relation to the number of 5-fluoro-dUMP (FdUMP) binding sites in human gastrointestinal cancers. 10652619 2000
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.100 GeneticVariation disease BEFREE To evaluate relationship between the cyclooxygenase-2 promoter 765G/C polymorphism and digestive cancer risk in China. 24969885 2014
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.100 GeneticVariation disease BEFREE Polymorphism of thymidylate synthase gene and chemosensitivity of 5-fluorouracil regimen in metastatic gastrointestinal cancer. 19426394 2009
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.090 GeneticVariation disease BEFREE Mice with mutations in the mismatch repair genes, Msh2 and Mlh1, exhibit a mismatch repair defect and are predisposed to developing gastrointestinal cancer, lymphomas and tumors of other organ systems. 10498885 1999
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.090 GeneticVariation disease BEFREE Epidemiologic, structural, and bioinformatic analyses were used to evaluate variants in the MSH2 and MLH1 genes in 187 subjects with suspected hereditary gastrointestinal cancer in China. 17011982 2006
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.090 GeneticVariation disease BEFREE This work availably evaluated the functional consequences of some missense mutations not previously determined in the hMLH1 gene and might be useful for the clinical diagnosis of hereditary gastrointestinal cancer, especially in East Asians. 18094436 2007
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.090 GeneticVariation disease BEFREE MLH1 V384D germline variant may not only contribute to gastrointestinal cancer predisposition but may also contribute to BC in East Asians. 31358837 2019
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.090 GeneticVariation disease BEFREE Gastrointestinal cancers and neurofibromatosis type 1 features in children with a germline homozygous MLH1 mutation. 14762794 2004