Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.350 GeneticVariation disease BEFREE A second ABC transporter, the hepatic phosphatidylcholine translocase ABCB4, increases the risk for gallstone disease, gallbladder cancer and chronic liver diseases in general, whereas the common PNPLA3 risk variant p.I148M decreases gallstone risk. 30608254 2019
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.350 GeneticVariation disease BEFREE A smaller group of patients might develop gallstones primarily due low phosphatidylcholine concentrations in bile as a result of loss-of-function mutations of the ABCB4 transporter (low phospholipid-associated cholelithiasis syndrome). 29635711 2018
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.350 GeneticVariation disease BEFREE Clinical criteria for LPAC syndrome caused by mutations in ABCB4 cannot be applied to pediatric patients with idiopathic gallstones. 24914347 2014
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.350 GeneticVariation disease BEFREE The young age of the patient, recurrence of gallstones after cholecystectomy and intrahepatic gallstones suggested a subtype of the low-phospholipid associated cholelithiasis syndrome, a monogenic form of cholesterol cholelithiasis due to variations of the ABCB4 gene that encodes the canalicular phospholipid transporter MDR3. 23619268 2013
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.350 GeneticVariation disease BEFREE Common variants of ABCB4 and ABCB11 and plasma lipid levels: a study in sib pairs with gallstones, and controls. 19408031 2009
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.350 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE Mutational analysis of ABCB4, screening for copy number variations by multiplex ligation-dependent probe amplification, genotyping for low expression allele c.1331T>C of ABCB11 and genotyping for variation c.55G>C in ABCG8 previously associated with cholesterol gallstones in adults was performed in 35 pediatric subjects with idiopathic gallstones who fulfilled the clinical criteria for low phospholipid-associated cholelithiasis syndrome (LPAC, OMIM #600803) and in 5 young females with suspected LPAC and their families (5 probands, 15 additional family members). 24914347 2014
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE The aim of the study is to investigate whether ABCG8-D19H is associated with gallstone recurrence after cholecystectomy. 22869156 2013
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE Our findings suggest that ABCG8 rs11887534, identified as a gallstone risk single-nucleotide polymorphism by whole genome scan, is also associated with an increased risk of biliary tract cancer. 21062971 2011
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE To test the hypothesis that ABCG8 (adenosine triphosphate-binding cassette transporter G8) Asp19His (D19H) genotype predicted risk of gallstones and biliary cancer in the general population, we studied 62,279 white individuals from The Copenhagen City Heart Study and The Copenhagen General Population Study, randomly selected to reflect the adult Danish population aged 20 to 80+ years. 21274884 2011
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE At allele level also, the ABCG8 variant allele conferred an increased risk for gallstone susceptibility (P = 0.043; OR = 2.12; 95% CI = 1.2-4.3). 21039838 2010
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE The GBC patients with gallstone disease harbouring the ABCG8 variant allele are at a higher risk, while the effect of this polymorphism on GBC patients without gallstones appears to be small. 19018975 2009
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE Recently a large twin study confirmed a genetic predisposition to gallstones and a genome-wide association scan identified the hepatocanalicular cholesterol transporter ABCG8 as the common susceptibility factor for gallstone disease. 18408466 2008
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE Various polymorphisms (A632V, T400K, D19H, M429V, and C54Y) in the ABCG8 and ABCG5 (Q604E) gene have been found to be associated with several facets of cholesterol metabolism, including baseline cholesterol level, cholesterol kinetics, individual responsiveness of plasma cholesterol to dietary and pharmaceutical interventions for hypercholesterolemia, and increased risk of gallstones. 18522623 2008
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE Consistent with the mouse model, heterozygosity for the lithogenic ABCG8 allele was associated with gallstones in humans; 21.4% of gallstone patients carried the heterozygous D19H genotype, compared with 8.6% of controls (OR = 2.954; P = 0.026). 17626266 2007
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease GWASDB A genome-wide association scan identifies the hepatic cholesterol transporter ABCG8 as a susceptibility factor for human gallstone disease. 17632509 2007
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.200 GeneticVariation disease BEFREE To investigate a possible association between transporter gene polymorphism and gallstone formation, we examined five common polymorphisms in the ABCG5 (Q604E) and ABCG8 (D19H, Y54C, T400K, A632V) genes in patients with gallstone disease (GS). 17612515 2007
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.100 GeneticVariation disease BEFREE It also shows that children with co-inheritance of low UGT1A1 (TA) n affinity genotypes may be at risk of gallstone, hence the need to follow them up. 31619193 2019
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.100 GeneticVariation disease BEFREE Indeed, this is the first report that interested in the study of polymorphisms in genes encoded for enzymes involved in the bilirubin metabolism: rs 4149056 of SLCO1B1 and rs4149000 of SLCO1A2 in combination with rs8175347 and rs887829 of UGT1A1 in order to find a correlation between the polymorphisms studied and the presence of gallstones in a population of sickle cell anemia (SCA) pediatric Tunisians. 26146896 2016
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.100 Biomarker disease BEFREE The Gilbert syndrome-associated functional TATA box variant UGT1A1*28 (A(TA)7TAA) was found to increase susceptibility to pigment gallstone formation in patients with haemolytic anaemia. 23517300 2013
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.100 GeneticVariation disease BEFREE Recent genome-wide association and candidate gene studies have identified common polymorphisms in enterohepatic transporters (ABCG5/8, SLC10A2) and the Gilbert syndrome UGT1A1 variant as genetic determinants of gallstone formation. 23340007 2013
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE The CETP TaqIB and APOE HhaI polymorphisms do not seem to have association with gallstones in the late postoperative bariatric surgery, considering that these genetic variants do not differ subgroups of patients who are eligible to routine prophylactic cholecystectomy, at least in Brazilian population. 22271356 2012
Entrez Id: 348
Gene Symbol: APOE
APOE
0.100 GeneticVariation disease BEFREE This meta-analysis aims to comprehensively evaluate the influence of a common ε2/ε3/ε4 polymorphism in Apo E gene on the risk of gallbladder stone disease. 23049877 2012
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.100 Biomarker disease BEFREE Linkage and case-control studies of candidate genes and recent genome-wide studies have identified multiple lithogenic genes, in particular the hepatocanalicular cholesterol transporter ABCG5/G8 and the bilirubin conjugating enzyme UGT1A1, as major genetic determinants of gallstones in humans. 21538282 2011
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.100 Biomarker disease BEFREE Patients with co-existing hereditary spherocytosis (HS) and UDP-glucuronosyltransferase 1A1 (UGT1A1) deficiency as Gilbert's syndrome (GS) have been reported, and previous studies have demonstrated an increased risk for developing gallstones in patients with co-inheritance of GS and HS. 21319362 2011