Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 AlteredExpression disease BEFREE The AFP levels were elevated in 8 cases of yolk sac tumor. 31627179 2020
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 AlteredExpression disease BEFREE It has been suggested that alpha-fetoprotein (AFP) can be applied as a feasible tumor marker because its level was elevated in >90% of YST. 31114774 2019
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker disease BEFREE The current study is a multi-faceted examination of yolk sac tumor-like phenotypes in endometrial tumors, based on an analysis of 3 groups of uterine tumors: Group 1: 9 endometrial tumors that had been classified as yolk sac tumor, or as having a yolk sac tumor component, were assessed with a 35-marker immunohistochemical panel, with the goal of defining their immunophenotypic spectrum; Group 2, comprised of 70 endometrial carcinomas of various histotypes, were analyzed for their expression of SALL4, Glypican-3, and AFP, to assess the specificity of these markers for yolk sac tumors relative to endometrial carcinomas; Group 3, comprised of 626 archived cases of endometrial carcinoma/carcinosarcoma, reviewed to define the frequency of yolk sac tumor-like morphology therein. 31375771 2019
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 GeneticVariation disease BEFREE This 18-year-old woman underwent laparoscopic pelvic tumor resection, considered her first surgery, 2 years ago, and pathology revealed YST with initial alpha-fetoprotein (AFP) level measuring >3,000 ng/mL. 30992672 2019
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker disease BEFREE Alpha-fetoprotein (AFP) is a useful tumor marker for ovarian germ cell tumors, particularly yolk sac tumor (YST). 29933751 2018
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 AlteredExpression disease BEFREE The intestinal-type mucinous glands were immunoreactive for SALL4 (4 cases), AFP (4 cases), glypican 3 (1 case), CDX2 (6 cases), and villin (7 cases), markers that are commonly expressed in YSTs, although the latter 2 markers would be expected to be positive in intestinal-type glands. 28582340 2018
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 AlteredExpression disease BEFREE For germ cell tumors, the mean preoperative serum α-fetoprotein (AFP) level was significantly higher in patients with yolk sac tumor than in those with teratomas (2,078 ng/mL vs 5.7 ng/mL). 30324570 2018
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker disease BEFREE Alpha-fetoprotein (AFP) is a well-known tumor marker of hepatic carcinoma and yolk sac tumor. 29788728 2018
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker disease BEFREE In all patients, elevation of alpha-fetoprotein indicated a yolk sac tumor component. 28306215 2017
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 Biomarker disease BEFREE This proportion of patients is even lower for those with seminomas or pure embryonal carcinomas as alpha-fetoprotein is predominantly related to yolk sac tumor and human chorionic gonadotropin to choriocarcinoma. 24922631 2014
Entrez Id: 174
Gene Symbol: AFP
AFP
0.100 AlteredExpression disease BEFREE We analyzed EPCAM expression by quantitative RT-PCR in 48 fresh-frozen GCT specimens of different histology (10 mature teratoma, MT; 6 immature teratoma, IT; 7 dysgerminoma; 6 mixed malignant GCTs; 19 yolk sac tumor, YST) and in the GCT cell lines NCCIT, TE76.T, JAR and 2102Ep, and correlated its expression with AFP and hCG protein levels, histologic differentiation, and clinical follow-up data. 22987628 2013
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.030 AlteredExpression disease BEFREE The current study is a multi-faceted examination of yolk sac tumor-like phenotypes in endometrial tumors, based on an analysis of 3 groups of uterine tumors: Group 1: 9 endometrial tumors that had been classified as yolk sac tumor, or as having a yolk sac tumor component, were assessed with a 35-marker immunohistochemical panel, with the goal of defining their immunophenotypic spectrum; Group 2, comprised of 70 endometrial carcinomas of various histotypes, were analyzed for their expression of SALL4, Glypican-3, and AFP, to assess the specificity of these markers for yolk sac tumors relative to endometrial carcinomas; Group 3, comprised of 626 archived cases of endometrial carcinoma/carcinosarcoma, reviewed to define the frequency of yolk sac tumor-like morphology therein. 31375771 2019
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.030 AlteredExpression disease BEFREE The intestinal-type mucinous glands were immunoreactive for SALL4 (4 cases), AFP (4 cases), glypican 3 (1 case), CDX2 (6 cases), and villin (7 cases), markers that are commonly expressed in YSTs, although the latter 2 markers would be expected to be positive in intestinal-type glands. 28582340 2018
Entrez Id: 645682
Gene Symbol: POU5F1P4
POU5F1P4
0.030 GeneticVariation disease BEFREE A bilateral primary yolk sac tumor of the lung associated with chromosome 3 polysomy: understanding the Oct 3/4 and Sox 2 interaction. 23114647 2013
Entrez Id: 642559
Gene Symbol: POU5F1P3
POU5F1P3
0.030 GeneticVariation disease BEFREE A bilateral primary yolk sac tumor of the lung associated with chromosome 3 polysomy: understanding the Oct 3/4 and Sox 2 interaction. 23114647 2013
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.030 GeneticVariation disease BEFREE A bilateral primary yolk sac tumor of the lung associated with chromosome 3 polysomy: understanding the Oct 3/4 and Sox 2 interaction. 23114647 2013
Entrez Id: 442916
Gene Symbol: MIR371A
MIR371A
0.030 Biomarker disease BEFREE Expression of the embryonic stem cell miR-371-3 and miR-302/367 clusters in SE/EC/YS suggest possible application of these micro-RNAs as GCC tumor-markers. 24012110 2013
Entrez Id: 442916
Gene Symbol: MIR371A
MIR371A
0.030 Biomarker disease BEFREE Herein we show that levels of all 8 main members of the miR-371∼373 and miR-302 clusters were elevated in the serum of a 4-year-old boy at the time of diagnosis of yolk sac tumor. 21173133 2011
Entrez Id: 442916
Gene Symbol: MIR371A
MIR371A
0.030 GeneticVariation disease BEFREE Sylamer revealed that the hexamer GCACTT, complementary to the 2- to 7-nucleotide miRNA seed AAGUGC shared by six members of the miR-371-373 and miR-302 clusters, was the only sequence significantly enriched in the 3'-untranslated region of mRNAs downregulated in pediatric malignant GCTs (as a group), YSTs and ECs, and in adult YSTs (all versus nonmalignant tissue controls; P < 0.05). 20332240 2010
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.030 AlteredExpression disease BEFREE OCT4 marked the nuclei of 6 cases, among which 5 cases also showed glypican 3 expression indicative of an admixed yolk sac tumor component. 20096442 2010
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.030 AlteredExpression disease BEFREE OCT4 marked the nuclei of 6 cases, among which 5 cases also showed glypican 3 expression indicative of an admixed yolk sac tumor component. 20096442 2010
Entrez Id: 645682
Gene Symbol: POU5F1P4
POU5F1P4
0.030 AlteredExpression disease BEFREE OCT4 marked the nuclei of 6 cases, among which 5 cases also showed glypican 3 expression indicative of an admixed yolk sac tumor component. 20096442 2010
Entrez Id: 642559
Gene Symbol: POU5F1P3
POU5F1P3
0.030 AlteredExpression disease BEFREE OCT4 marked the nuclei of 6 cases, among which 5 cases also showed glypican 3 expression indicative of an admixed yolk sac tumor component. 20096442 2010
Entrez Id: 642559
Gene Symbol: POU5F1P3
POU5F1P3
0.030 Biomarker disease BEFREE GDF3 positivity, in the absence of OCT3/4 and CD30, combined with morphological features, is helpful in the diagnosis of yolk sac tumor. 19396148 2009
Entrez Id: 5460
Gene Symbol: POU5F1
POU5F1
0.030 Biomarker disease BEFREE GDF3 positivity, in the absence of OCT3/4 and CD30, combined with morphological features, is helpful in the diagnosis of yolk sac tumor. 19396148 2009