Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.010 AlteredExpression group BEFREE Intriguingly, in eight of the nine (88.9%) MDS-F cases with elevated NESCs, a majority of NESCs also expressed GFAP, with an additional increase in GFAP single-positive cells. 30632058 2019
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.010 Biomarker group BEFREE Multivariate analysis showed diagnosis was the independent risk factor for antibodies, as acute lymphoblastic leukemia (ALL) patients (HR0.141, 95% CI: 0.037-0.538, p = 0.004) had a lower incidence of class II PRAs and DSAs against HLA-B, DQ, and DR, whereas myelodysplastic syndrome (MDS) patients had a higher incidence of PRAs for both class I and class II (HR4.790, 95% CI: 1.010-22.716, p = 0.049), and DSAs against HLA-A, B, C, DP, and DQ. 30655602 2019
Entrez Id: 3574
Gene Symbol: IL7
IL7
0.010 PosttranslationalModification group BEFREE IL-7 gene methylation appears in peripheral blood leukemia cells and AML and MDS cell lines of AML patients. 30779089 2019
Entrez Id: 145270
Gene Symbol: PRIMA1
PRIMA1
0.010 GeneticVariation group BEFREE Synergistic effects of PRIMA-1Met (APR-246) and Azacitidine in TP53-mutated myelodysplastic syndromes and acute myeloid leukemia. 31488557 2019
Entrez Id: 7529
Gene Symbol: YWHAB
YWHAB
0.010 Biomarker group BEFREE In addition, the expression of BCAS4, ADA, and YWHAB genes was significantly reduced in MDS patients without chromosome 20 abnormalities, which suggests that these three genes were commonly involved in the molecular pathogenesis of MDS. 31299412 2019
Entrez Id: 3082
Gene Symbol: HGF
HGF
0.010 Biomarker group BEFREE We previously reported that the expression of serine protease inhibitor kunitz-type2 (SPINT2/HAI-2), an inhibitor of hepatocyte growth factor (HGF) activation, is significantly lower in BMMSC from myelodysplastic syndromes (MDS) patients compared to healthy donors (HD). 30484958 2019
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.010 GeneticVariation group BEFREE In the validation cohort, only a polymorphism in MLH1 was significantly associated with development of MDS in patients with poor cytogenetics (p = 0.0004). 30861523 2019
Entrez Id: 574411
Gene Symbol: MIR451A
MIR451A
0.010 Biomarker group BEFREE With regard to the prognosis, the levels of miR-27a-3p, miR-150-5p, miR-199a-5p, miR-223-3p and miR-451a were reduced in higher-risk MDS. 28485163 2019
Entrez Id: 5688
Gene Symbol: PSMA7
PSMA7
0.010 Biomarker group BEFREE Stimuli provided by MDS-MSCs impaired the growth and function of healthy HSPCs, which is further sustained autonomously in HSPCs for significant periods of time resulting in a failure for active hematopoietic engraftment across primary and secondary transplant recipients (chimerism: 0.34-91% vs 2.78%, engraftment frequencies: at 0.06 ± 0.02 vs full engraftment for MDS-MSC vs healthy groups, respectively). 30575819 2019
Entrez Id: 51135
Gene Symbol: IRAK4
IRAK4
0.010 Biomarker group BEFREE Collectively, mutations in U2AF1 induce expression of therapeutically targetable 'active' IRAK4 isoforms and provide a genetic link to activation of chronic innate immune signalling in MDS and AML. 31011167 2019
Entrez Id: 4780
Gene Symbol: NFE2L2
NFE2L2
0.010 Biomarker group BEFREE Silencing NRF2 or dual specificity protein phosphatase 1 also significantly sensitized cytarabine treatment and inhibited tumors in MDS cells transplanted mouse models <i>in vivo</i> Our study suggests that targeting NRF2 in combination with conventional chemotherapy could pave the way for future therapy for high-risk MDS. 30262569 2019
Entrez Id: 6596
Gene Symbol: HLTF
HLTF
0.010 GeneticVariation group BEFREE In summary, our results indicate that a familial MDS-associated HLTF E259K germline mutation induces accumulation of DNA double-strand breaks, possibly through impaired PCNA polyubiquitination. 30696947 2019
Entrez Id: 3210
Gene Symbol: HOXB@
HOXB@
0.010 Biomarker group BEFREE Here, we investigated the functions of HOXB-AS3, a lncRNA located at human HOXB cluster, in the myeloid cells, and analyzed the prognostic significances in patients with AML and MDS. 31234830 2019
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.010 AlteredExpression group BEFREE Through assessment of patient gene expression, we have identified STK4 (encoding Hippo kinase MST1) as a 20q gene that is downregulated below haploinsufficient amounts in myelodysplastic syndrome (MDS) and myeloproliferative neoplasm (MPN). 31434702 2019
Entrez Id: 407020
Gene Symbol: MIR28
MIR28
0.010 AlteredExpression group BEFREE The miRNA profile showed that mir-28 and mir-LETD7 were under expressed whilst mir-584J and mir-4485 were over expressed in MV from MDS. 30454964 2019
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.010 GeneticVariation group BEFREE Incorporating the revised International Prognostic Scoring System classification with the ACE-27 and TP53 mutation status improved outcome prediction in patients with MDS. 30861111 2019
Entrez Id: 5542
Gene Symbol: PRB1
PRB1
0.010 Biomarker group BEFREE Anemia of lower-risk myelodysplastic syndromes (MDSs) and primary myelofibrosis (PMF) generally becomes resistant to available treatments, leading to red blood cell (RBC) transfusions, iron overload, shortened survival, and poor quality of life. 30602619 2019
Entrez Id: 902
Gene Symbol: CCNH
CCNH
0.010 GeneticVariation group BEFREE In the screening cohort, 6 candidate SNPs were associated with the tendency to develop MDS: rs4135113 (TDG, p = 0.03), rs12917 (MGMT, p = 0.003), rs2230641 (CCNH, p = 0.01), rs2228529 and rs2228526 (ERCC6, p = 0.04 and p = 0.03), and rs1799977 (MLH1, p = 0.04). 30861523 2019
Entrez Id: 128553
Gene Symbol: TSHZ2
TSHZ2
0.010 GeneticVariation group BEFREE In our previous study, we identified fusion of the additional sex combs-like 1 (ASXL1) and teashirt zinc finger homeobox 2 genes in a patient with myelodysplastic syndrome. 30868899 2019
Entrez Id: 344875
Gene Symbol: COL6A4P1
COL6A4P1
0.010 Biomarker group BEFREE This study included patients with IPSS lower-risk MDS from the DRAMA (An Observational Study for Dacogen Long-Term Treatment in Patients With Myelodysplastic Syndrome; NCT01400633) and DIVA (A Study for Dacogen Treatment in Patients With Myelodysplastic Syndrome; NCT01041846) studies, which were prospective observational studies on the efficacy and safety of decitabine treatment in patients with MDS. 31375393 2019
Entrez Id: 11040
Gene Symbol: PIM2
PIM2
0.010 Biomarker group BEFREE Therefore, PIM2 may be a potential biomarker for the diagnosis of MDS and AML or a target for novel therapeutic agents. 31186757 2019
Entrez Id: 404266
Gene Symbol: HOXB-AS3
HOXB-AS3
0.010 AlteredExpression group BEFREE Further, we retrospectively analyzed the HOXB-AS3 expression in 193 patients with AML and 157 with MDS by microarray analysis, and evaluated its clinical importance. 31234830 2019
Entrez Id: 9242
Gene Symbol: MSC
MSC
0.010 Biomarker group BEFREE MDS-MSCs that fail to respond to hypomethylating therapy are associated with patients with rapid adverse disease transformation and this further suggests that MDS-MSCs may be an integral part of disease progression and have prognostic value as well as potential as a therapeutic target. 30575819 2019
Entrez Id: 10273
Gene Symbol: STUB1
STUB1
0.010 Biomarker group BEFREE ICUS, IDUS, CHIP and CCUS: Diagnostic Criteria, Separation from MDS and Clinical Implications. 29860246 2019
Entrez Id: 10653
Gene Symbol: SPINT2
SPINT2
0.010 Biomarker group BEFREE We previously reported that the expression of serine protease inhibitor kunitz-type2 (SPINT2/HAI-2), an inhibitor of hepatocyte growth factor (HGF) activation, is significantly lower in BMMSC from myelodysplastic syndromes (MDS) patients compared to healthy donors (HD). 30484958 2019