Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2981582
rs2981582
0.030 GeneticVariation BEFREE Five SNPs associated with breast cancer risk predominantly among ER-positive tumors (rs2981582/FGFR2, rs4415084/MRPS30, rs1219648/FGFR2, rs2981579/FGFR2, and rs11200014/FGFR2). 22965832

2012

dbSNP: rs2981582
rs2981582
0.030 GeneticVariation BEFREE Homozygous variant genotypes of rs2981582 were strongly related to lymph node negative breast cancer (OR = 3.33, P = 6 × 10(-7)) and the minor allele of rs2981582 was associated with increased risk of ER+ tumors (OR = 1.57, P = 0.02; OR = 2.15, P = 0.001, for heterozygous and homozygous variant genotypes, respectively) and increased risk of distant metastasis development (OR = 2.30, P = 4 × 10(-3); OR = 3.57, P = 6 × 10(-5), for heterozygous and homozygous variant genotypes, respectively) in a dose dependent manner. 22910930

2012

dbSNP: rs2981582
rs2981582
0.030 GeneticVariation BEFREE FGFR2 rs1219648 and rs2981582 genotypes were significantly associated with breast cancer in EA only in estrogen receptor-positive (ER+), progesterone receptor-positive (PR+) and HER2/Neu-negative (HER2-) tumors. 19028704

2009

dbSNP: rs1219648
rs1219648
0.020 GeneticVariation BEFREE We here studied the association of rs1219648 in FGFR2 and rs1042522 in TP53 and their interaction in development of early onset sporadic breast cancer in Iranian Azeri population to evaluate epistatic effects on the risk of mammary neoplasia. 25292094

2014

dbSNP: rs1219648
rs1219648
0.020 GeneticVariation BEFREE FGFR2 rs1219648 and rs2981582 genotypes were significantly associated with breast cancer in EA only in estrogen receptor-positive (ER+), progesterone receptor-positive (PR+) and HER2/Neu-negative (HER2-) tumors. 19028704

2009

dbSNP: rs755793
rs755793
0.010 GeneticVariation BEFREE These findings indicated that the TT genotype and T allele frequencies of rs675436 were associated with an increased risk of EBVaGC, while allele A or G of rs755793 had no effect on the occurrence of EBV-associated tumors in Chinese Han population. 29446487

2018

dbSNP: rs121918502
rs121918502
0.010 GeneticVariation BEFREE FGFR3 mutations (p.S249C) were found in 8.5% (6/71) of tumors and were significantly associated with FGFR3 protein overexpression (p < 0.001), and unfavourable clinical outcome (p = 0.001). 27669755

2016

dbSNP: rs758829154
rs758829154
0.010 GeneticVariation BEFREE NGS detected 3 activating mutations in ESR1, and 3 hot-spot mutations in PIK3CA, and 3 in TP53 in baseline cfDNA, and the ESR1 p.D538G mutation in 1 matched circulating tumor cell sample. ddPCR analysis was more sensitive than NGS and identified 6 additional baseline cfDNA samples with the ESR1 p.D538G mutation at a frequency of <1%. 25979954

2015

dbSNP: rs1057520029
rs1057520029
0.010 GeneticVariation BEFREE We identified one somatic heterozygous missense mutation, p.K660N (c.1980G>C), within the tyrosine kinase domain of FGFR2 in tumor tissue of a sporadic breast cancer patient, which is likely mediated by the FGFR2-IIIb isoform. 23527311

2013

dbSNP: rs1299249877
rs1299249877
0.010 GeneticVariation BEFREE We identified one somatic heterozygous missense mutation, p.K660N (c.1980G>C), within the tyrosine kinase domain of FGFR2 in tumor tissue of a sporadic breast cancer patient, which is likely mediated by the FGFR2-IIIb isoform. 23527311

2013

dbSNP: rs148478597
rs148478597
0.010 GeneticVariation BEFREE We identified one somatic heterozygous missense mutation, p.K660N (c.1980G>C), within the tyrosine kinase domain of FGFR2 in tumor tissue of a sporadic breast cancer patient, which is likely mediated by the FGFR2-IIIb isoform. 23527311

2013

dbSNP: rs1057519854
rs1057519854
0.010 GeneticVariation BEFREE The two most common somatic mutations identified were S252W (in eight tumors) and N550K (in five samples). 17525745

2007

dbSNP: rs121913476
rs121913476
0.010 GeneticVariation BEFREE The two most common somatic mutations identified were S252W (in eight tumors) and N550K (in five samples). 17525745

2007

dbSNP: rs79184941
rs79184941
0.010 GeneticVariation BEFREE The two most common somatic mutations identified were S252W (in eight tumors) and N550K (in five samples). 17525745

2007