Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE Patient-specific hiPSCs were generated from a symptomatic SQTS patient carrying the N588K mutation in the KCNH2 gene, differentiated into cardiomyocytes, and compared with healthy and isogenic (established by CRISPR/Cas9-based mutation correction) control hiPSC-derived cardiomyocytes (hiPSC-CMs). 31072576

2019

dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE This study recruited 1 patient with short QT syndrome type 1 carrying a mutation (N588K) in KCNH2 as well as 2 healthy control subjects. 29574456

2018

dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE A gain of function mutation N588K in the KCNH2 gene that encodes HERG channels has been shown to underlie the SQT1 form of short QT syndrome (SQTS). 21130771

2011

dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE Here, for the first time, electrophysiological effects were studied of a gain-of-function hERG mutation (N588K; responsible for the 'SQT1' variant of the short QT syndrome) on current (I(hERG1a/1b)) carried by co-expressed hERG1a/1b channels. 19501051

2009

dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE To evaluate the electrophysiological consequences of the short-QT syndrome at the level of the cardiac AP, the Markov model of wild-type (WT) KCNH2 channel was modified to obtain a model of the KCNH2 channel with the N588K mutation associated with the short-QT syndrome. 16565572

2006

dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE Hence, unlike the known mutations in the two other SQTS forms (N588K in HERG and V307L in KvLQT1), simulations using the D172N and WT/D172N mutations fully accounted for the ECG phenotype of tall and asymmetrically shaped T waves. 15761194

2005

dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE Modulation of I(Kr) inactivation by mutation N588K in KCNH2: a link to arrhythmogenesis in short QT syndrome. 16039272

2005

dbSNP: rs104894021
rs104894021
0.080 GeneticVariation BEFREE Our study confirms that N588K is a hotspot for familial form of the short QT syndrome. 15828882

2005

dbSNP: rs104894584
rs104894584
0.040 GeneticVariation BEFREE SQT3 variant (linked to the inward rectifier potassium current I <sub>K1</sub>) of SQTS, results from a gain-of-function mutation (Kir2.1 D172N) in the KCNJ2-encoded channels, which is associated with ventricular fibrillation (VF). 28812984

2017

dbSNP: rs104894584
rs104894584
0.040 GeneticVariation BEFREE The SQTS variant 3 is linked to D172N mutation to the KCNJ2 gene that causes a gain-of-function to the inward rectifier potassium channel current (I <sub>K1</sub>), which shortens the ventricular action potential duration (APD) and effective refractory period (ERP). 28592292

2017

dbSNP: rs104894584
rs104894584
0.040 GeneticVariation BEFREE A gain-of-function <i>KCNJ2</i> D172N mutation in KCNJ2-encoded Kir2.1 channels underlies one form of short QT syndrome (SQT3), which is associated with increased susceptibility to arrhythmias and sudden death. 29290967

2017

dbSNP: rs104894584
rs104894584
0.040 GeneticVariation BEFREE One form of the short QT syndrome (SQT3) has been linked to the D172N gain-in-function mutation to Kir2.1, which preferentially increases outward current through channels responsible for inward rectifier K(+) current (I(K1)). 22308236

2012

dbSNP: rs199472947
rs199472947
0.020 GeneticVariation BEFREE Moreover, QTc of SQT patient and action potential durations of SQT iPSC-CMs were both normalized by quinidine, indicating that quinidine is beneficial to KCNH2 T618I of SQT. 30582453

2019

dbSNP: rs199472947
rs199472947
0.020 GeneticVariation BEFREE The altered function of T618I-HERG channels suggests that this mutation in the KCNH2 gene is responsible for the SQTS phenotype in this family. 21130771

2011

dbSNP: rs199472687
rs199472687
0.010 GeneticVariation BEFREE Compared to the WT, AP simulations demonstrated marked rate-dependent shortening of AP duration (APD) for V141M, predicting a SQTS phenotype. 29213224

2017

dbSNP: rs120074195
rs120074195
0.010 GeneticVariation BEFREE Incorporating the V307L mutation into simulations reproduced defining features of the SQTS: abbreviation of the QT interval, and increases in T wave amplitude and Tpeak-Tend duration. 17905416

2008