DisGeNET - a database of gene-disease associations

List of shared variants

Rheumatoid Arthritis, C0003873

Disease: Malignant neoplasm of breast

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1075496	NRM	0.882	0.160	6	30690462	intron variant	C/A	snv		0.47	3
rs2009658	LOC100287329 ; LTA	0.882	0.160	6	31570467	upstream gene variant	C/G	snv		0.15	4
rs2977537	CCN4	0.851	0.160	8	133207820	intron variant	G/A;C	snv			4
rs2977530	CCN4	0.851	0.160	8	133202869	intron variant	G/A	snv		0.35	5
rs5030772	FASLG	0.790	0.320	1	172664210	intron variant	A/G	snv		9.9E-02	7
rs62514004	CCN4	0.790	0.240	8	133190246	upstream gene variant	A/G	snv		0.28	8
rs9533156	TNFSF11	0.807	0.280	13	42573535	intron variant	T/C	snv		0.47	8
rs2073617	COLEC10 ; TNFRSF11B	0.776	0.360	8	118952044	upstream gene variant	G/A	snv		0.58	9
rs7539542	ADIPOR1	0.807	0.200	1	202940846	3 prime UTR variant	G/C	snv		0.58	9
rs1862513	RETN	0.763	0.360	19	7668907	upstream gene variant	C/G;T	snv			11
rs3819025	IL17A	0.752	0.480	6	52186476	intron variant	G/A	snv	0.13	8.5E-02	11
rs1063320	HLA-G	0.752	0.360	6	29830972	3 prime UTR variant	C/G;T	snv			12
rs2221903	IL21-AS1 ; IL21	0.752	0.360	4	122617757	intron variant	C/T	snv		0.77	12
rs3102735	COLEC10 ; TNFRSF11B	0.752	0.400	8	118952831	upstream gene variant	T/C	snv		0.17	12
rs4684677	GHRLOS ; GHRL	0.742	0.360	3	10286769	missense variant	T/A	snv	0.10	6.6E-02	13
rs767455	TNFRSF1A	0.742	0.400	12	6341779	synonymous variant	T/C	snv	0.37	0.40	13
rs1801280	NAT2	0.716	0.440	8	18400344	missense variant	T/C	snv	0.38	0.39	14
rs4644	LGALS3	0.732	0.320	14	55138217	missense variant	C/A;G	snv	0.35		14
rs2229080	DCC	0.742	0.320	18	52906232	missense variant	C/A;G	snv	0.45		16
rs2232365	FOXP3	0.716	0.480	X	49259429	intron variant	T/C	snv			16
rs4810485	CD40	0.732	0.480	20	46119308	intron variant	T/A;G	snv			16
rs1412125	HMGB1	0.724	0.360	13	30467458	intron variant	C/G;T	snv			17
rs1799930	NAT2	0.716	0.400	8	18400593	missense variant	G/A	snv	0.27	0.27	17
rs2069705	IFNG-AS1 ; IFNG	0.695	0.440	12	68161231	intron variant	G/A;C	snv			19
rs2073618	COLEC10 ; TNFRSF11B	0.716	0.480	8	118951813	missense variant	G/C	snv	0.52	0.60	19