Disease: Malignant neoplasm of breast
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 63
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs2231142
ABCG2
0.583 0.680 4 88131171 missense variant G/C;T snv 4.0E-06; 0.12 56
rs1800682
ACTA2 ; FAS
0.637 0.440 10 88990206 non coding transcript exon variant A/G snv 0.54 32
rs266729
ADIPOQ
0.637 0.560 3 186841685 upstream gene variant C/A;G;T snv 37
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs7539542
ADIPOR1
0.807 0.200 1 202940846 3 prime UTR variant G/C snv 0.58 9
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs2066853
AHR
0.653 0.600 7 17339486 missense variant G/A snv 0.15 0.22 34
rs1800469
B9D2 ; TGFB1
0.547 0.760 19 41354391 intron variant A/G snv 0.69 78
rs2977530
CCN4
0.851 0.160 8 133202869 intron variant G/A snv 0.35 5
rs2977537
CCN4
0.851 0.160 8 133207820 intron variant G/A;C snv 4
rs62514004
CCN4
0.790 0.240 8 133190246 upstream gene variant A/G snv 0.28 8
rs1883832
CD40
0.581 0.680 20 46118343 5 prime UTR variant T/C snv 0.75 0.80 52
rs4810485
CD40
0.732 0.480 20 46119308 intron variant T/A;G snv 16
rs5443
CDCA3 ; GNB3
0.532 0.760 12 6845711 synonymous variant C/T snv 0.36 0.44 106
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 33
rs2073617
COLEC10 ; TNFRSF11B
0.776 0.360 8 118952044 upstream gene variant G/A snv 0.58 9
rs2073618
COLEC10 ; TNFRSF11B
0.716 0.480 8 118951813 missense variant G/C snv 0.52 0.60 19
rs3102735
COLEC10 ; TNFRSF11B
0.752 0.400 8 118952831 upstream gene variant T/C snv 0.17 12
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37 44
rs2229080
DCC
0.742 0.320 18 52906232 missense variant C/A;G snv 0.45 16
rs2227983
EGFR
0.658 0.520 7 55161562 missense variant G/A;C;T snv 0.29 31