Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10757278
CDKN2B-AS1
0.620 0.520 9 22124478 intron variant A/G snv 0.40 44
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30 46
rs1333049
CDKN2B-AS1
0.614 0.520 9 22125504 intron variant G/C snv 0.41 60
rs16147
LOC107986777 ; NPY
0.695 0.400 7 24283791 upstream gene variant T/C snv 0.48 18
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs1862513
RETN
0.763 0.360 19 7668907 upstream gene variant C/G;T snv 11
rs2144908
LOC105372629 ; HNF4A
0.851 0.120 20 44357077 intron variant G/A snv 0.18 5
rs2943634 0.763 0.200 2 226203364 intergenic variant A/C;G snv 15
rs2943641 0.763 0.160 2 226229029 intergenic variant T/C snv 0.67 18
rs3091244
CRP
0.724 0.280 1 159714875 upstream gene variant G/A;T snv 17
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs405509
APOE
0.667 0.480 19 44905579 upstream gene variant T/G snv 0.58 30
rs662799
APOA5
0.689 0.480 11 116792991 upstream gene variant G/A snv 0.90 33
rs773641005
GOT2
0.742 0.240 16 58723829 missense variant T/C snv 14
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1267969615
ACE
0.532 0.760 17 63490960 missense variant T/C snv 4.0E-06 100
rs1232898090
PPARA
0.637 0.600 22 46198429 missense variant G/C;T snv 4.0E-06; 4.0E-06 40
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs16139
NPY ; LOC107986777
0.658 0.560 7 24285260 missense variant T/A;C snv 4.0E-06; 3.0E-02 36
rs2295490
TRIB3
0.724 0.320 20 388261 missense variant A/G;T snv 0.18; 4.0E-06 16
rs2075291
APOA5 ; ZPR1
0.752 0.400 11 116790676 missense variant C/A;T snv 6.4E-03; 4.0E-06 15
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs80356814
LMNA
0.732 0.320 1 156138697 synonymous variant C/T snv 8.0E-06 15