Disease: Secondary malignant neoplasm of lymph node
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10053538
HAVCR2
0.807 0.160 5 157110499 intron variant C/A;T snv 7
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs10877887
LINC01465 ; MIRLET7I
0.701 0.440 12 62603400 non coding transcript exon variant T/C snv 0.42 18
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs11225395
MMP8
0.776 0.360 11 102725749 intron variant A/C;G snv 11
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs11730582
SPP1
0.807 0.240 4 87975269 non coding transcript exon variant T/C snv 0.37 10
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30 46
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs1219648
FGFR2
0.716 0.320 10 121586676 intron variant A/G;T snv 17
rs13293512 0.763 0.360 9 94167461 intron variant T/C snv 0.24 11
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs16949649
NME1 ; NME1-NME2
0.776 0.200 17 51152947 upstream gene variant T/C snv 0.39 12
rs17530068
LOC105377871
0.882 0.120 6 81483392 intergenic variant T/C snv 0.19 3
rs1800624
PBX2 ; AGER
0.658 0.480 6 32184610 upstream gene variant A/G;T snv 33
rs1800872
IL19 ; IL10
0.495 0.840 1 206773062 5 prime UTR variant T/G snv 0.69 119
rs187115
CD44
0.695 0.320 11 35154612 intron variant T/C snv 0.37 22
rs2070744
NOS3
0.608 0.680 7 150992991 intron variant C/T snv 0.70 54
rs2105269
GALNT16
0.882 0.120 14 69280517 intron variant A/G snv 0.35 4
rs2249825
HMGB1
0.695 0.440 13 30463766 5 prime UTR variant G/A;C;T snv 23
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs2302254
NME1-NME2 ; NME1
0.752 0.240 17 51153539 5 prime UTR variant C/T snv 0.22 15
rs2881766
ESR1
0.882 0.120 6 151797984 intron variant T/G snv 0.35 5
rs3020449
ESR2
0.807 0.200 14 64306674 intron variant A/G;T snv 10
rs3218038
CCNE1
0.882 0.120 19 29814988 intron variant G/T snv 9.1E-02 4