DisGeNET - a database of gene-disease associations

List of shared variants

Adenocarcinoma of prostate, C0007112

Disease: Transitional cell carcinoma of bladder

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67	242
rs104886003	PIK3CA	0.562	0.440	3	179218303	missense variant	G/A;C	snv	4.0E-06	71
rs104894229	LRRC56 ; HRAS	0.564	0.600	11	534289	missense variant	C/A;G;T	snv		73
rs104894230	HRAS ; LRRC56	0.564	0.600	11	534288	missense variant	C/A;G;T	snv		73
rs1057519862	ERBB2	0.851	0.160	17	39723405	missense variant	G/A	snv		5
rs1057519883	CDKN2A	0.742	0.280	9	21971120	missense variant	C/G;T	snv		14
rs1057519886	CTNNB1	0.752	0.240	3	41224609	missense variant	T/A;C;G	snv		11
rs1057519927	PIK3CA	0.716	0.240	3	179218295	missense variant	A/C;G;T	snv		19
rs1057519932	PIK3CA	0.683	0.320	3	179234298	missense variant	T/G	snv		22
rs1057519940	PIK3CA	0.752	0.200	3	179218308	missense variant	G/T	snv		13
rs1057519956	CNOT9	0.827	0.200	2	218583025	missense variant	T/C	snv		5
rs1057519957	CNOT9	0.827	0.200	2	218583026	missense variant	C/G	snv		5
rs1057519975	TP53	0.649	0.480	17	7675209	missense variant	A/C;G;T	snv		34
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs113488022	BRAF	0.351	0.840	7	140753336	missense variant	A/C;G;T	snv	4.0E-06	490
rs11540652	TP53	0.592	0.640	17	7674220	missense variant	C/A;G;T	snv	1.2E-05	57
rs121912651	TP53	0.605	0.680	17	7674221	missense variant	G/A;C	snv	4.0E-06	53
rs121912656	TP53	0.662	0.560	17	7674229	missense variant	C/A;G;T	snv	4.0E-06; 4.0E-06	28
rs121912666	TP53	0.645	0.360	17	7674872	missense variant	T/C;G	snv	8.0E-06	34
rs121913228	CTNNB1	0.742	0.200	3	41224621	missense variant	T/C;G	snv		14
rs121913233	HRAS ; LRRC56	0.627	0.520	11	533874	missense variant	T/A;C;G	snv		37
rs121913273	PIK3CA	0.605	0.440	3	179218294	missense variant	G/A;C	snv		44
rs121913274	PIK3CA	0.645	0.320	3	179218304	missense variant	A/C;G;T	snv		33
rs121913275	PIK3CA	0.672	0.320	3	179218305	missense variant	G/A;C;T	snv	4.0E-06	26
rs121913279	PIK3CA	0.526	0.560	3	179234297	missense variant	A/G;T	snv	4.0E-06; 4.0E-06	101