DisGeNET - a database of gene-disease associations

List of shared variants

Adenocarcinoma of prostate, C0007112

Disease: Transitional cell carcinoma of bladder

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs1057519927	PIK3CA	0.716	0.240	3	179218295	missense variant	A/C;G;T	snv		19
rs1057519975	TP53	0.649	0.480	17	7675209	missense variant	A/C;G;T	snv		34
rs113488022	BRAF	0.351	0.840	7	140753336	missense variant	A/C;G;T	snv	4.0E-06	490
rs121913274	PIK3CA	0.645	0.320	3	179218304	missense variant	A/C;G;T	snv		33
rs121913396	CTNNB1	0.732	0.200	3	41224607	missense variant	A/C;G;T	snv		13
rs397517201	PIK3CA	0.732	0.240	3	179218307	missense variant	A/C;G;T	snv		16
rs530941076	TP53	0.695	0.280	17	7674873	missense variant	A/C;G;T	snv	4.0E-06	21
rs864622237	TP53	0.716	0.320	17	7674263	missense variant	A/C;G;T	snv		17
rs967461896	TP53	0.724	0.240	17	7675086	missense variant	A/C;G;T	snv		17
rs121913279	PIK3CA	0.526	0.560	3	179234297	missense variant	A/G;T	snv	4.0E-06; 4.0E-06	101
rs121913286	PIK3CA	0.677	0.280	3	179218306	missense variant	C/A;G	snv		23
rs104894229	LRRC56 ; HRAS	0.564	0.600	11	534289	missense variant	C/A;G;T	snv		73
rs104894230	HRAS ; LRRC56	0.564	0.600	11	534288	missense variant	C/A;G;T	snv		73
rs11540652	TP53	0.592	0.640	17	7674220	missense variant	C/A;G;T	snv	1.2E-05	57
rs121912656	TP53	0.662	0.560	17	7674229	missense variant	C/A;G;T	snv	4.0E-06; 4.0E-06	28
rs121913355	BRAF	0.641	0.520	7	140781602	missense variant	C/A;G;T	snv	4.0E-06	42
rs121913357	BRAF	0.742	0.320	7	140781603	stop gained	C/A;G;T	snv		12
rs121913400	CTNNB1	0.683	0.360	3	41224610	missense variant	C/A;G;T	snv		26
rs121913403	CTNNB1	0.683	0.240	3	41224622	missense variant	C/A;G;T	snv		23
rs121913409	CTNNB1	0.708	0.400	3	41224646	missense variant	C/A;G;T	snv		21
rs121913496	LRRC56 ; HRAS	0.724	0.440	11	533873	missense variant	C/A;G;T	snv		16
rs121913500	IDH1	0.529	0.600	2	208248388	missense variant	C/A;G;T	snv	4.0E-06	96
rs28934575	TP53	0.641	0.400	17	7674230	missense variant	C/A;G;T	snv		37
rs28934576	TP53	0.554	0.600	17	7673802	missense variant	C/A;G;T	snv	4.0E-06; 1.6E-05	78