Disease: Rheumatoid Arthritis
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 25
rs34536443
TYK2
0.667 0.400 19 10352442 missense variant G/C snv 2.7E-02 2.8E-02 20
rs706778
IL2RA
0.695 0.320 10 6056986 intron variant C/T snv 0.46 15
rs7731626
ANKRD55
0.716 0.240 5 56148856 intron variant G/A snv 0.30 15
rs10174238
STAT4
0.724 0.200 2 191108308 intron variant G/A snv 0.70 12
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 11
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 9
rs10488631
TNPO3
0.742 0.280 7 128954129 upstream gene variant T/C snv 9.0E-02 7
rs11066301
PTPN11
0.827 0.200 12 112433568 intron variant A/G snv 0.30 7
rs13101828
DGKQ
0.851 0.160 4 971932 intron variant A/G snv 0.43 6
rs12531711
TNPO3
0.827 0.200 7 128977412 intron variant A/C;G snv 5
rs17849502
NCF2 ; SMG7
0.827 0.240 1 183563445 missense variant G/A;C;T snv 4.0E-06; 4.0E-06; 3.4E-02 5
rs2431098 0.827 0.240 5 160460329 intron variant A/G;T snv 5
rs35677470
DNASE1L3
0.807 0.160 3 58197909 missense variant G/A;C snv 4.8E-02; 4.0E-06 5
rs35929052 0.827 0.160 16 85960878 downstream gene variant C/G;T snv 5
rs7579944 0.882 0.200 2 30222160 intergenic variant T/C;G snv 5
rs10954214
IRF5
0.851 0.160 7 128949579 3 prime UTR variant C/T snv 0.64 4
rs11085725
TYK2
0.851 0.160 19 10351837 intron variant C/T snv 0.24 4
rs112846137 0.851 0.160 3 160595133 intergenic variant G/T snv 5.3E-02 4
rs1217393
AP4B1-AS1
0.851 0.160 1 113891324 intron variant G/A snv 0.42 4
rs13238352
TNPO3
0.827 0.240 7 129007888 intron variant C/T snv 9.1E-02 4
rs13389408
STAT4
0.851 0.160 2 191068557 3 prime UTR variant T/C snv 7.4E-02 4
rs193107685 0.851 0.160 7 74123572 downstream gene variant T/C snv 1.0E-02 4
rs2422345
LOC100506023 ; TNFSF4
0.851 0.160 1 173368608 upstream gene variant G/A snv 0.63 4