Disease: Primary malignant neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3809865
THCAT158 ; ITGB3
0.790 0.240 17 47311220 3 prime UTR variant T/A;G snv 11
rs9350
EXO1
0.742 0.240 1 241885372 missense variant C/T snv 0.21 0.19 16
rs1136201
ERBB2
0.645 0.280 17 39723335 missense variant A/G;T snv 0.20 34
rs13387042
LOC105373874 ; LOC101928278
0.732 0.280 2 217041109 intergenic variant A/G snv 0.44 16
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs77191406
TNFAIP3
0.790 0.280 6 137881704 3 prime UTR variant C/T snv 7.2E-04 12
rs121912664
TP53
0.630 0.320 17 7670699 missense variant C/A;G;T snv 1.2E-05 44
rs1360485
HMGB1
0.742 0.320 13 30457747 3 prime UTR variant C/T snv 0.58 16
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs371074389
LOC112268426 ; CXCR4
0.732 0.320 2 136115226 synonymous variant C/T snv 4.0E-06 4.2E-05 16
rs61764370
KRAS
0.662 0.320 12 25207290 3 prime UTR variant A/C snv 6.2E-02 29
rs6505162
NSRP1 ; MIR3184 ; MIR423
0.695 0.320 17 30117165 5 prime UTR variant A/C;T snv 0.50; 3.1E-05 25
rs762846821
TP53
0.614 0.320 17 7675151 missense variant C/A;T snv 8.0E-06 57
rs766914563
LOC112268426 ; CXCR4
0.732 0.320 2 136115082 synonymous variant C/T snv 7.0E-06 16
rs781172058
CXCR4
0.732 0.320 2 136115340 synonymous variant C/T snv 4.0E-06 16
rs11547328
CDK4
0.701 0.360 12 57751648 missense variant G/A;T snv 4.0E-06 27
rs1412125
HMGB1
0.724 0.360 13 30467458 intron variant C/G;T snv 17
rs2981582
FGFR2
0.695 0.360 10 121592803 intron variant A/G snv 0.58 21
rs486907
RNASEL
0.667 0.360 1 182585422 missense variant C/T snv 0.31 0.28 32
rs712
KRAS
0.677 0.360 12 25209618 3 prime UTR variant A/C snv 0.46 24
rs11549467
HIF1A ; HIF1A-AS3
0.653 0.400 14 61740857 missense variant G/A snv 8.9E-03 7.0E-03 30
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs20576
TNFRSF10A
0.637 0.400 8 23200707 missense variant T/G snv 0.15 0.14 34
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42