Disease: Primary malignant neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800624
PBX2 ; AGER
0.658 0.480 6 32184610 upstream gene variant A/G;T snv 33
rs1800625
AGER ; PBX2
0.641 0.680 6 32184665 upstream gene variant A/G snv 0.15 39
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs1800795
IL6-AS1 ; IL6 ; STEAP1B
0.494 0.840 7 22727026 intron variant C/G snv 0.71 140
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs1801157
CXCL12
0.611 0.600 10 44372809 3 prime UTR variant C/T snv 0.16 46
rs2249825
HMGB1
0.695 0.440 13 30463766 5 prime UTR variant G/A;C;T snv 23
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs2494752
AKT1
0.790 0.120 14 104797271 upstream gene variant A/G snv 0.85 10
rs2536
MTOR
0.776 0.240 1 11106656 3 prime UTR variant T/C snv 5.8E-02 11
rs2555639 0.851 0.080 4 174540379 non coding transcript exon variant T/C snv 0.38 7
rs2981582
FGFR2
0.695 0.360 10 121592803 intron variant A/G snv 0.58 21
rs3212227
IL12B
0.566 0.840 5 159315942 3 prime UTR variant T/G snv 0.26 65
rs3743073
CHRNA3
0.807 0.120 15 78617197 intron variant G/T snv 0.61 11
rs3809865
THCAT158 ; ITGB3
0.790 0.240 17 47311220 3 prime UTR variant T/A;G snv 11
rs3834129
CASP8
0.627 0.560 2 201232809 upstream gene variant AGTAAG/- del 0.48 38
rs3918242
MMP9
0.602 0.680 20 46007337 upstream gene variant C/T snv 0.14 54
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs60745952
LOC107986195 ; LOC105377481
0.925 0.080 4 148827842 intron variant T/C snv 0.13 6
rs61764370
KRAS
0.662 0.320 12 25207290 3 prime UTR variant A/C snv 6.2E-02 29
rs629367
MIR100HG ; MIRLET7A2
0.776 0.200 11 122146306 intron variant C/A snv 0.88 11
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv 67