Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs13332
CTSB
0.925 0.120 8 11849072 synonymous variant T/C;G snv 3.5E-02; 0.56 6
rs1990172
MACC1
0.827 0.120 7 20164512 intron variant A/C snv 0.27 6
rs2289030
MIR492 ; KRT19P2
0.882 0.120 12 94834510 non coding transcript exon variant G/C snv 9.7E-02 6.3E-02 6
rs61573157
ADAMTS14
0.882 0.160 10 70760503 missense variant C/T snv 8.6E-02 7.5E-02 6
rs676387
HSD17B1 ; LOC108783654
0.882 0.120 17 42554255 non coding transcript exon variant C/A snv 0.25 6
rs9288516
XRCC5
0.827 0.120 2 216188541 intron variant T/A snv 5.0E-02 6
rs10053538
HAVCR2
0.807 0.160 5 157110499 intron variant C/A;T snv 7
rs4024
AFP
0.827 0.120 4 73435667 intron variant G/A snv 0.52 7
rs6877842
DROSHA ; C5orf22
0.807 0.320 5 31532531 intron variant G/C snv 0.16 7
rs737241
AFP
0.827 0.120 4 73451012 intron variant G/A;C snv 7
rs7664413
VEGFC ; LOC105377555
0.851 0.160 4 176687553 intron variant C/T snv 0.24 0.25 7
rs7963551
RAD52
0.807 0.160 12 912349 3 prime UTR variant T/G snv 0.13 7
rs8073069
BIRC5
0.807 0.200 17 78213692 upstream gene variant G/C snv 0.33 7
rs1057519906
IDH2
0.882 0.120 15 90088607 missense variant T/A;C snv 8
rs62514004
CCN4
0.790 0.240 8 133190246 upstream gene variant A/G snv 0.28 8
rs2305160
NPAS2 ; NPAS2-AS1
0.776 0.200 2 100974842 missense variant A/G snv 0.71 0.75 9
rs629849
IGF2R
0.827 0.160 6 160073377 missense variant A/C;G;T snv 0.90 0.91 9
rs754332870
TP53
0.790 0.240 17 7676240 missense variant C/G snv 4.0E-06 9
rs9642880
CASC11
0.776 0.240 8 127705823 intron variant G/A;T snv 9
rs1046282
ERCC1 ; CD3EAP ; PPP1R13L
0.776 0.160 19 45407414 3 prime UTR variant A/G snv 0.30 10
rs1048638
CA9
0.807 0.160 9 35681125 3 prime UTR variant C/A;G snv 10
rs12338
CTSB
0.807 0.200 8 11853379 missense variant G/A;C;T snv 8.0E-06; 0.38; 2.4E-05 10
rs3212948
ERCC1
0.776 0.160 19 45421104 intron variant G/C snv 0.53 10
rs3741219
MRPL23 ; H19 ; HOTS
0.776 0.280 11 1995389 non coding transcript exon variant A/G snv 0.42 10
rs4516035
VDR
0.776 0.360 12 47906043 non coding transcript exon variant T/C snv 0.31 10