Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800625
AGER ; PBX2
0.641 0.680 6 32184665 upstream gene variant A/G snv 0.15 39
rs1800682
ACTA2 ; FAS
0.637 0.440 10 88990206 non coding transcript exon variant A/G snv 0.54 32
rs1800797
IL6 ; IL6-AS1 ; STEAP1B
0.605 0.800 7 22726602 non coding transcript exon variant A/G snv 0.72 43
rs1801394
FASTKD3 ; MTRR
0.531 0.840 5 7870860 missense variant A/G snv 0.47 0.45 101
rs1805105
AXIN1
0.776 0.280 16 346264 synonymous variant A/G snv 0.61 0.69 11
rs2274223
PLCE1
0.620 0.400 10 94306584 missense variant A/G snv 0.28 0.31 40
rs2305160
NPAS2 ; NPAS2-AS1
0.776 0.200 2 100974842 missense variant A/G snv 0.71 0.75 9
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs3741219
MRPL23 ; H19 ; HOTS
0.776 0.280 11 1995389 non coding transcript exon variant A/G snv 0.42 10
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs4135385
CTNNB1
0.742 0.320 3 41237949 non coding transcript exon variant A/G snv 0.19 14
rs4880
SOD2
0.500 0.840 6 159692840 missense variant A/G snv 0.48 0.47 131
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs62514004
CCN4
0.790 0.240 8 133190246 upstream gene variant A/G snv 0.28 8
rs879253942
TP53
0.677 0.400 17 7673826 missense variant A/G snv 28
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs10719
DROSHA
0.677 0.680 5 31401340 3 prime UTR variant A/G;T snv 0.69 24
rs121913279
PIK3CA
0.526 0.560 3 179234297 missense variant A/G;T snv 4.0E-06; 4.0E-06 101
rs2234922
EPHX1
0.630 0.440 1 225838705 missense variant A/G;T snv 0.19; 2.8E-05 42
rs9275572 0.724 0.360 6 32711222 upstream gene variant A/G;T snv 15
rs1047781
LOC105447645 ; FUT2
0.790 0.200 19 48703374 missense variant A/T snv 3.6E-02 1.2E-02 11
rs308379
FGF2
1.000 0.080 4 122861741 intron variant A/T snv 0.68 2
rs16405
BTRC
0.882 0.120 10 101553963 3 prime UTR variant AACAGTGGA/- del 0.31 4
rs3834129
CASP8
0.627 0.560 2 201232809 upstream gene variant AGTAAG/- del 0.48 38
rs10519613
IL15
1.000 0.080 4 141732931 3 prime UTR variant C/A snv 0.10 3