Disease: Malignant neoplasm of stomach
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs5275
PTGS2
0.583 0.560 1 186673926 3 prime UTR variant A/G;T snv 55
rs689470
PTGS2
0.776 0.240 1 186671926 3 prime UTR variant G/A;C;T snv 9
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv 67
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 64
rs759412116
ERCC2
0.581 0.640 19 45352210 missense variant C/G;T snv 4.0E-06; 6.0E-05 55
rs763059810
CXCR4
0.623 0.600 2 136115750 missense variant T/C snv 4.0E-06 41
rs7758229
SLC22A3
0.732 0.120 6 160419220 intron variant G/A;T snv 16
rs7813
GEMIN4
0.689 0.360 17 744946 missense variant G/A;C snv 0.63 22
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs822395
ADIPOQ
0.776 0.240 3 186849018 intron variant C/A;G snv 10
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 113
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs758272654
GNAS
0.611 0.680 20 58909201 synonymous variant T/C snv 4.0E-06 7.0E-06 50
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs16901946
PCAT1 ; CASC19 ; PRNCR1
0.827 0.160 8 127088680 non coding transcript exon variant A/G snv 1.7E-02 8
rs6218
LINC02456 ; HELLPAR ; IGF1
0.732 0.440 12 102399855 3 prime UTR variant A/G snv 2.1E-02 13
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs5742612
LOC105369944 ; IGF1
0.752 0.440 12 102481086 intron variant A/G snv 5.6E-02 11
rs1048943
CYP1A1
0.533 0.720 15 74720644 missense variant T/A;C;G snv 0.11 5.9E-02 88
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs3742330
DICER1
0.662 0.640 14 95087025 3 prime UTR variant A/G snv 8.7E-02 24
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131