DisGeNET - a database of gene-disease associations

List of shared variants

Prostate carcinoma, C0600139

Disease: Malignant neoplasm of stomach

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF GENOME	Num. diseases
rs1927911	TLR4	0.658	0.640	9	117707776	intron variant	A/G	snv	0.62	28
rs2010963	VEGFA	0.542	0.840	6	43770613	5 prime UTR variant	C/G	snv	0.68	82
rs20417	PACERR ; PTGS2	0.576	0.600	1	186681189	non coding transcript exon variant	C/G;T	snv		57
rs2069762	IL2	0.672	0.560	4	122456825	upstream gene variant	A/C	snv	0.24	23
rs2243250	IL4	0.570	0.760	5	132673462	upstream gene variant	C/T	snv	0.35	61
rs2279744	MDM2	0.605	0.640	12	68808800	intron variant	T/G	snv	0.31	48
rs2295080	MTOR	0.695	0.320	1	11262571	upstream gene variant	G/C;T	snv		20
rs2296147	BIVM-ERCC5 ; ERCC5	0.695	0.280	13	102846025	5 prime UTR variant	T/C	snv	0.38	21
rs2298881	ERCC1	0.653	0.400	19	45423658	intron variant	C/A;T	snv		25
rs243865	MMP2	0.600	0.640	16	55477894	intron variant	C/T	snv	0.19	48
rs266729	ADIPOQ	0.637	0.560	3	186841685	upstream gene variant	C/A;G;T	snv		37
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv	0.52	83
rs28360071	XRCC4	0.708	0.240	5	83142293	intron variant	GATGAGGAAACTAACTCTCAGTGGTGTTTA/-	delins	0.48	18
rs2853669	TERT	0.649	0.320	5	1295234	upstream gene variant	A/G	snv	0.25	35
rs3025039	VEGFA	0.576	0.720	6	43784799	3 prime UTR variant	C/T	snv	0.13	62
rs3742330	DICER1	0.662	0.640	14	95087025	3 prime UTR variant	A/G	snv	8.7E-02	24
rs3783553	IL1A	0.667	0.480	2	112774138	3 prime UTR variant	-/TGAA	delins		26
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv		306
rs4073	CXCL8	0.566	0.800	4	73740307	upstream gene variant	A/T	snv	0.46	64
rs4143815	CD274	0.689	0.400	9	5468257	3 prime UTR variant	G/C	snv	0.23	20
rs4759314	HOTAIR	0.649	0.440	12	53968051	non coding transcript exon variant	G/A	snv	0.93	31
rs4938723	MIR34C ; BTG4 ; MIR34B ; LOC728196	0.574	0.680	11	111511840	intron variant	T/C	snv	0.32	60
rs505922	ABO	0.689	0.520	9	133273813	intron variant	C/T	snv		34
rs5275	PTGS2	0.583	0.560	1	186673926	3 prime UTR variant	A/G;T	snv		55
rs5742612	LOC105369944 ; IGF1	0.752	0.440	12	102481086	intron variant	A/G	snv	5.6E-02	11