DisGeNET - a database of gene-disease associations

List of shared variants

Hashimoto Disease, C0677607

Disease: Graves Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2184658	HLX-AS1 ; HLX	0.925	0.120	1	220879115	intron variant	C/G	snv		0.20	2
rs2476601	AP4B1-AS1 ; PTPN22	0.498	0.800	1	113834946	missense variant	A/G	snv	0.93	0.93	121
rs7530511	IL23R ; C1orf141	0.742	0.400	1	67219704	missense variant	T/A;C	snv	0.88		12
rs7537605	VAV3	0.882	0.120	1	107800465	intron variant	G/A;T	snv			3
rs1143627	IL1B	0.605	0.760	2	112836810	5 prime UTR variant	G/A	snv		0.56	47
rs11571297		0.882	0.120	2	203880280	regulatory region variant	T/C	snv		0.44	3
rs11675434	TPO	0.827	0.240	2	1404043	non coding transcript exon variant	C/T	snv		0.39	5
rs1534422	MIR3681HG	0.827	0.160	2	12500615	intron variant	G/A	snv		0.52	6
rs1990760	IFIH1	0.672	0.480	2	162267541	missense variant	C/T	snv	0.50	0.45	33
rs2071400	TPO	0.882	0.120	2	1412867	intron variant	C/T	snv		0.11	3
rs2071403	TPO	0.925	0.120	2	1413472	5 prime UTR variant	A/G;T	snv			2
rs231775	CTLA4	0.504	0.720	2	203867991	missense variant	A/G;T	snv	0.42; 4.0E-06		115
rs3087243	CTLA4	0.623	0.720	2	203874196	downstream gene variant	G/A	snv		0.37	44
rs5742909	CTLA4	0.614	0.680	2	203867624	upstream gene variant	C/T	snv		6.7E-02	40
rs7574865	STAT4	0.574	0.720	2	191099907	intron variant	T/G	snv		0.79	59
rs917997		0.701	0.480	2	102454108	downstream gene variant	T/A;C	snv			20
rs13093110	LPP	0.882	0.120	3	188407332	intron variant	C/T	snv		0.42	4
rs696217	GHRL ; GHRLOS	0.662	0.640	3	10289773	missense variant	G/T	snv	8.8E-02	7.1E-02	32
rs10004195	TLR10	0.790	0.320	4	38783103	upstream gene variant	T/A	snv		0.29	8
rs7041	GC	0.576	0.800	4	71752617	missense variant	A/C;T	snv	0.52; 4.0E-06		64
rs867770797	EDNRA	0.851	0.200	4	147519875	missense variant	G/A	snv			8
rs2563298	TMCO6 ; CD14	0.851	0.200	5	140631730	3 prime UTR variant	C/A	snv		0.26	4
rs2569192	CD14 ; TMCO6	0.925	0.120	5	140635623	upstream gene variant	G/C	snv		0.27	2
rs3212227	IL12B	0.566	0.840	5	159315942	3 prime UTR variant	T/G	snv		0.26	65
rs3792876	SLC22A4	0.790	0.280	5	132301616	intron variant	C/T	snv		6.9E-02	7