DisGeNET - a database of gene-disease associations

List of shared variants

Hashimoto Disease, C0677607

Disease: Graves Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs7041	GC	0.576	0.800	4	71752617	missense variant	A/C;T	snv	0.52; 4.0E-06		64
rs1269486	GATA3 ; GATA3-AS1 ; LOC107984204	0.925	0.120	10	8054236	intron variant	A/G	snv		0.77	2
rs179247	TSHR	0.882	0.160	14	80966202	intron variant	A/G	snv		0.40	5
rs2476601	AP4B1-AS1 ; PTPN22	0.498	0.800	1	113834946	missense variant	A/G	snv	0.93	0.93	121
rs4411444	TSHR	0.925	0.120	14	80978764	intron variant	A/G	snv		0.43	2
rs5498	ICAM4 ; ICAM1	0.531	0.760	19	10285007	missense variant	A/G	snv	0.44	0.37	99
rs731236	VDR	0.542	0.760	12	47844974	synonymous variant	A/G	snv	0.33	0.34	81
rs744166	STAT3	0.689	0.560	17	42362183	intron variant	A/G	snv		0.48	22
rs853326	TG	0.882	0.120	8	132897729	missense variant	A/G	snv	0.58	0.60	3
rs2071403	TPO	0.925	0.120	2	1413472	5 prime UTR variant	A/G;T	snv			2
rs231775	CTLA4	0.504	0.720	2	203867991	missense variant	A/G;T	snv	0.42; 4.0E-06		115
rs2563298	TMCO6 ; CD14	0.851	0.200	5	140631730	3 prime UTR variant	C/A	snv		0.26	4
rs1544410	VDR	0.542	0.760	12	47846052	intron variant	C/A;G;T	snv			78
rs17879469	HLA-DRB1	0.763	0.360	6	32584333	missense variant	C/G	snv	1.3E-05		9
rs2184658	HLX-AS1 ; HLX	0.925	0.120	1	220879115	intron variant	C/G	snv		0.20	2
rs4903961	TSHR	0.925	0.120	14	80996305	intron variant	C/G	snv		0.39	2
rs1800471	TGFB1	0.597	0.840	19	41352971	missense variant	C/G;T	snv	5.6E-02		48
rs1061501	IRF7	0.851	0.200	11	614864	synonymous variant	C/T	snv	0.83	0.85	4
rs11675434	TPO	0.827	0.240	2	1404043	non coding transcript exon variant	C/T	snv		0.39	5
rs12101255	TSHR	0.925	0.120	14	80984708	intron variant	C/T	snv		0.37	2
rs13093110	LPP	0.882	0.120	3	188407332	intron variant	C/T	snv		0.42	4
rs1990760	IFIH1	0.672	0.480	2	162267541	missense variant	C/T	snv	0.50	0.45	33
rs2071400	TPO	0.882	0.120	2	1412867	intron variant	C/T	snv		0.11	3
rs2076740	TG	0.827	0.160	8	132971813	missense variant	C/T	snv	0.31	0.37	5
rs2270450	LOC101926934 ; SLC25A27	0.827	0.200	6	46677138	3 prime UTR variant	C/T	snv		0.29	5