Disease: Malignant tumor of colon
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs750521832
MMP8
0.732 0.200 11 102718452 missense variant A/G snv 4.0E-06 14
rs4919687
CYP17A1
0.742 0.160 10 102835491 non coding transcript exon variant G/A snv 0.25 14
rs12548629
BAALC ; BAALC-AS1
0.776 0.120 8 103189173 intron variant C/T snv 0.24 10
rs141752671 0.708 0.280 11 103745837 intron variant A/G snv 5.4E-03 17
rs148883465 0.708 0.280 11 103813371 intron variant A/G snv 7.2E-03 17
rs2302615
ODC1-DT ; SNORA80B ; ODC1
0.807 0.120 2 10448012 intron variant C/T snv 0.31 7
rs7679673 0.677 0.440 4 105140377 intron variant C/A snv 0.50 28
rs1805097
IRS2
0.689 0.360 13 109782884 missense variant C/G;T snv 0.35 22
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs12241008
VTI1A
0.716 0.160 10 112520943 intron variant T/C snv 0.13 16
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 16
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs1801155
APC
0.649 0.440 5 112839514 missense variant T/A snv 8.0E-06; 2.0E-03 1.2E-03 42
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 18
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs9651118
MTHFR
0.683 0.480 1 11802157 intron variant T/C snv 0.18 20
rs11200014
FGFR2
0.695 0.280 10 121575416 intron variant G/A;T snv 0.34 19
rs1800449
LOX
0.641 0.400 5 122077513 missense variant C/A;T snv 4.0E-06; 0.17 33
rs1801725
CASR
0.633 0.600 3 122284910 missense variant G/T snv 0.13 0.11 39
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121