Disease: Malignant tumor of colon
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1011970
CDKN2B-AS1
0.677 0.320 9 22062135 intron variant G/T snv 0.23 22
rs1039659576
MTR
0.689 0.520 1 236803473 missense variant A/G snv 21
rs1044129
AVEN ; RYR3
0.790 0.200 15 33866065 3 prime UTR variant A/G;T snv 9
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 16
rs11119608
KCNH1
0.708 0.280 1 210816167 intron variant T/G snv 0.21 17
rs1114167806
MSH2
0.827 0.200 2 47463096 stop gained ATGA/-;ATGAATGA delins 7
rs11168936
TUBA1C
0.708 0.280 12 49251457 intron variant T/A;C snv 17
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 18
rs11200014
FGFR2
0.695 0.280 10 121575416 intron variant G/A;T snv 0.34 19
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs115392158
HLA-B
0.708 0.280 6 31347004 intron variant A/G snv 17
rs115707823 0.701 0.320 6 30374976 intergenic variant G/A snv 19
rs11844632
RAD51B
0.708 0.280 14 68559662 intron variant G/A snv 0.23 17
rs11907546 0.708 0.280 20 34131991 upstream gene variant C/A;T snv 17
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30 46
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs12241008
VTI1A
0.716 0.160 10 112520943 intron variant T/C snv 0.13 16
rs12548629
BAALC ; BAALC-AS1
0.776 0.120 8 103189173 intron variant C/T snv 0.24 10
rs12601991
HNF1B
0.708 0.280 17 37741642 intron variant T/A;G snv 17
rs12778366
SIRT1
0.724 0.480 10 67883321 upstream gene variant T/C;G snv 13
rs13254738
PRNCR1 ; CASC19 ; PCAT1
0.807 0.160 8 127092098 non coding transcript exon variant C/A;T snv 8
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 18