Disease: Ulcerative Colitis ×
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs6584283
rs6584283
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		T 0.800 GeneticVariation GWASDB Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. 21297633 2011
dbSNP: rs6584283
rs6584283
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		T 0.800 GeneticVariation GWASCAT Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. 21297633 2011
dbSNP: rs11190140
rs11190140
Entrez Id: 159296;101927324
Gene Symbol: NKX2-3;LINC01475
NKX2-3;LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		T 0.800 GeneticVariation GWASDB Genome-wide association identifies multiple ulcerative colitis susceptibility loci. 20228799 2010
dbSNP: rs11190140
rs11190140
Entrez Id: 159296;101927324
Gene Symbol: NKX2-3;LINC01475
NKX2-3;LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		T 0.800 GeneticVariation GWASCAT Genome-wide association identifies multiple ulcerative colitis susceptibility loci. 20228799 2010
dbSNP: rs6584283
rs6584283
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		0.800 GeneticVariation GWASDB Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region. 19915572 2009
dbSNP: rs6584283
rs6584283
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		0.800 GeneticVariation GWASCAT Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region. 19915572 2009
dbSNP: rs10883365
rs10883365
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		0.030 GeneticVariation BEFREE This meta-analysis provided a robust result that persons with a G or T allele may have a moderately increased risk of CD, and suggested that rs10883365 polymorphism was also a candidate gene polymorphism for UC susceptibility. 24473197 2014
dbSNP: rs10883365
rs10883365
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		0.030 GeneticVariation BEFREE We confirmed the association of SNP rs10883365 located in the 5' flanking region of NKX2-3 with Japanese UC and colonic CD and determined the risk haplotype (haplotype B) for UC. 21514341 2011
dbSNP: rs10883365
rs10883365
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		0.030 GeneticVariation BEFREE NKX2-3 rs10883365 variant allele was associated with increased risk for CD (P = 0.009, OR = 1.24, 95% CI = 1.06-1.48) and UC (P = 0.001, OR = 1.36, 95% CI = 1.13-1.63), whereas variant IRGM allele increased risk for CD (P = 0.029, OR = 1.36, 95% CI = 1.03-1.79). 21049557 2010
dbSNP: rs11596008
rs11596008
Entrez Id: 101927324
Gene Symbol: LINC01475
LINC01475
CUI: C0009324
Disease:
Ulcerative Colitis 		0.010 GeneticVariation BEFREE A total of 344 patients with Crohn's disease (CD), 253 patients with ulcerative colitis (UC), and 243 healthy controls (HCs) were genotyped for 3 tag-single nucleotide polymorphisms (SNPs; rs10883365, rs888208, and rs11596008) around NKX2.3. 21514341 2011