Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs199589947
rs199589947
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C4310761
Disease:
HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA
0.800 GeneticVariation UNIPROT LARS2 Variants Associated with Hydrops, Lactic Acidosis, Sideroblastic Anemia, and Multisystem Failure. 26537577 2016
dbSNP: rs199589947
rs199589947
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
0.800 GeneticVariation UNIPROT Mutations in LARS2, encoding mitochondrial leucyl-tRNA synthetase, lead to premature ovarian failure and hearing loss in Perrault syndrome. 23541342 2013
dbSNP: rs199589947
rs199589947
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C4310761
Disease:
HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA
A 0.800 CausalMutation CLINVAR
dbSNP: rs199589947
rs199589947
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
A 0.800 CausalMutation CLINVAR
dbSNP: rs199589947
rs199589947
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C0685838
Disease:
Gonadal dysgenesis XX type deafness
0.710 GeneticVariation BEFREE A family was homozygous for mitochondrial leucyl aminocyl tRNA synthetase (mtLeuRS) (LARS2) p.(Thr522Asn), previously associated with Perrault syndrome. 26970254 2017
dbSNP: rs199589947
rs199589947
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C0685838
Disease:
Gonadal dysgenesis XX type deafness
A 0.710 CausalMutation CLINVAR
dbSNP: rs2578673
rs2578673
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C1836233
Disease:
AIDS, PROGRESSION TO
T 0.700 GeneticVariation GWASCAT Association Between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants From the Strategic Timing of AntiRetroviral Treatment Trial. 31219150 2019
dbSNP: rs2578673
rs2578673
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C1836230
Disease:
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1, SUSCEPTIBILITY TO
T 0.700 GeneticVariation GWASCAT Association Between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants From the Strategic Timing of AntiRetroviral Treatment Trial. 31219150 2019
dbSNP: rs2578673
rs2578673
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C1836232
Disease:
ACQUIRED IMMUNODEFICIENCY SYNDROME, PROGRESSION TO
T 0.700 GeneticVariation GWASCAT Association Between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants From the Strategic Timing of AntiRetroviral Treatment Trial. 31219150 2019
dbSNP: rs2578673
rs2578673
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C1836231
Disease:
HIV-1, RESISTANCE TO
T 0.700 GeneticVariation GWASCAT Association Between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants From the Strategic Timing of AntiRetroviral Treatment Trial. 31219150 2019
dbSNP: rs2578673
rs2578673
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C0376705
Disease:
Viral Load result
T 0.700 GeneticVariation GWASCAT Association Between Single-Nucleotide Polymorphisms in HLA Alleles and Human Immunodeficiency Virus Type 1 Viral Load in Demographically Diverse, Antiretroviral Therapy-Naive Participants From the Strategic Timing of AntiRetroviral Treatment Trial. 31219150 2019
dbSNP: rs1482465
rs1482465
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C1837461
Disease:
SCOLIOSIS, ISOLATED, SUSCEPTIBILITY TO, 3
0.700 GeneticVariation GWASCAT The coexistence of copy number variations (CNVs) and single nucleotide polymorphisms (SNPs) at a locus can result in distorted calculations of the significance in associating SNPs to disease. 30019117 2018
dbSNP: rs1482465
rs1482465
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C0410702
Disease:
Adolescent idiopathic scoliosis
0.700 GeneticVariation GWASCAT The coexistence of copy number variations (CNVs) and single nucleotide polymorphisms (SNPs) at a locus can result in distorted calculations of the significance in associating SNPs to disease. 30019117 2018
dbSNP: rs864309642
rs864309642
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
T 0.700 CausalMutation CLINVAR First independent replication of the involvement of LARS2 in Perrault syndrome by whole-exome sequencing of an Italian family. 26657938 2016
dbSNP: rs864309643
rs864309643
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
A 0.700 CausalMutation CLINVAR First independent replication of the involvement of LARS2 in Perrault syndrome by whole-exome sequencing of an Italian family. 26657938 2016
dbSNP: rs879255606
rs879255606
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C4310761
Disease:
HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA
0.700 GeneticVariation UNIPROT LARS2 Variants Associated with Hydrops, Lactic Acidosis, Sideroblastic Anemia, and Multisystem Failure. 26537577 2016
dbSNP: rs1559484149
rs1559484149
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
G 0.700 GeneticVariation CLINVAR
dbSNP: rs398123036
rs398123036
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
T 0.700 CausalMutation CLINVAR
dbSNP: rs398123037
rs398123037
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
G 0.700 CausalMutation CLINVAR
dbSNP: rs774649299
rs774649299
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
T 0.700 CausalMutation CLINVAR
dbSNP: rs776171893
rs776171893
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C3809105
Disease:
PERRAULT SYNDROME 4
T 0.700 CausalMutation CLINVAR
dbSNP: rs786205560
rs786205560
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C0685838
Disease:
Gonadal dysgenesis XX type deafness
C 0.700 GeneticVariation CLINVAR
dbSNP: rs71645922
rs71645922
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C0011860
Disease:
Diabetes Mellitus, Non-Insulin-Dependent
0.020 GeneticVariation BEFREE Our replication studies for the two low-frequency variants, rs9825041 and H324Q, failed to confirm an association with type 2 diabetes in Dutch, Scandinavian and UK samples (OR 1.03 [95% CI 0.95-1.12], p = 0.45, n = 31,962 and OR 0.99 [0.90-1.08], p = 0.78, n = 35,715 respectively). 19847392 2010
dbSNP: rs71645922
rs71645922
Entrez Id: 23395
Gene Symbol: LARS2
LARS2
CUI: C0011860
Disease:
Diabetes Mellitus, Non-Insulin-Dependent
0.020 GeneticVariation BEFREE The mechanism by which the H324Q variant enhances type 2 diabetes risk needs to be further established. 15919814 2005
dbSNP: rs773142741
rs773142741
Entrez Id: 23395;100885795
Gene Symbol: LARS2;LARS2-AS1
LARS2;LARS2-AS1
CUI: C0685838
Disease:
Gonadal dysgenesis XX type deafness
0.010 GeneticVariation BEFREE Mutation c.1196A>G (p.Asn399Ser) recurred for the first time in a patient with PRLTS and the second mutation c.1802G>A (p.Arg601Gln) was novel for the disorder. 28178980 2017