ICOS, inducible T cell costimulator, 29851

N. diseases: 193; N. variants: 9
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs4675374
rs4675374
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0007570
Disease:
Celiac Disease
A 0.800 GeneticVariation GWASCAT Multiple common variants for celiac disease influencing immune gene expression. 20190752 2010
dbSNP: rs4675374
rs4675374
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0007570
Disease:
Celiac Disease
A 0.800 GeneticVariation GWASDB Multiple common variants for celiac disease influencing immune gene expression. 20190752 2010
dbSNP: rs4675374
rs4675374
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0004096
Disease:
Asthma
0.700 GeneticVariation GWASDB Association between ORMDL3, IL1RL1 and a deletion on chromosome 17q21 with asthma risk in Australia. 21150878 2011
dbSNP: rs4675374
rs4675374
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0004364
Disease:
Autoimmune Diseases
0.700 GeneticVariation GWASDB Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci. 21383967 2011
dbSNP: rs4675374
rs4675374
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0026769
Disease:
Multiple Sclerosis
0.700 GeneticVariation GWASDB Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364 2011
dbSNP: rs4675374
rs4675374
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0021053
Disease:
Immune System Diseases
0.700 GeneticVariation GWASDB Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci. 21383967 2011
dbSNP: rs1559035937
rs1559035937
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C3149378
Disease:
IMMUNODEFICIENCY, COMMON VARIABLE, 1
C 0.700 GeneticVariation CLINVAR Impaired CD4 and CD8 effector function and decreased memory T cell populations in ICOS-deficient patients. 19380800 2009
dbSNP: rs1559035937
rs1559035937
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C3149378
Disease:
IMMUNODEFICIENCY, COMMON VARIABLE, 1
C 0.700 GeneticVariation CLINVAR Homozygous loss of ICOS is associated with adult-onset common variable immunodeficiency. 12577056 2003
dbSNP: rs1559035937
rs1559035937
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C3149378
Disease:
IMMUNODEFICIENCY, COMMON VARIABLE, 1
C 0.700 GeneticVariation CLINVAR ICOS is critical for CD40-mediated antibody class switching. 11343122 2001
dbSNP: rs10932037
rs10932037
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C1304470
Disease:
Generalized vitiligo
0.020 GeneticVariation BEFREE The first study, of SNPs rs1863800, rs231806, rs231775, rs3087243, rs11571302, rs11571297, and rs10932037, showed no allelic, genotypic, or haplotypic association with generalized vitiligo. 19175525 2009
dbSNP: rs10932037
rs10932037
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C1304470
Disease:
Generalized vitiligo
0.020 GeneticVariation BEFREE Examination of five SNPs in the CTLA4 gene (rs1863800, rs231775, rs3087243, rs11571302, rs11571297, rs10932037) in the same 126 families yielded no evidence of allelic or genotypic association with either generalized vitiligo or the expanded autoimmune phenotype. 18200060 2008
dbSNP: rs10932029
rs10932029
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0019163
Disease:
Hepatitis B
0.010 GeneticVariation BEFREE We found that <i>ICOS</i> rs10932029 T>C polymorphism might increase the risk of HCC in male, ≥53 years, never smoking, never drinking and non-chronic HBV infection subgroups. 31235485 2019
dbSNP: rs10932029
rs10932029
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C2239176
Disease:
Liver carcinoma
0.010 GeneticVariation BEFREE We found that <i>ICOS</i> rs10932029 T>C polymorphism might increase the risk of HCC in male, ≥53 years, never smoking, never drinking and non-chronic HBV infection subgroups. 31235485 2019
dbSNP: rs4404254
rs4404254
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C2239176
Disease:
Liver carcinoma
0.010 GeneticVariation BEFREE We selected <i>inducible T cell costimulator</i> (<i>ICOS</i>) rs4404254 T>C, rs10932029 T>C, <i>CD28</i> rs3116496 T>C and <i>CD80</i> rs7628626 C>A SNPs and assessed the potential relationship of these SNPs with hepatocellular carcinoma (HCC) risk. 31235485 2019
dbSNP: rs4404254
rs4404254
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C0002895
Disease:
Anemia, Sickle Cell
0.010 GeneticVariation BEFREE We hypothesize that there is a significant interethnic diversity in the CD14 (rs2569190), CD28 (rs35593994), CTLA-4 (rs5742909) and ICOS (rs4404254) gene polymorphisms among and between SCD groups. 31474499 2019
dbSNP: rs10932029
rs10932029
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0023890
Disease:
Liver Cirrhosis
0.010 GeneticVariation BEFREE The rs10932029 genotype "TC" might be an LC-protective factor for HBV genotype C infection. 30600290 2018
dbSNP: rs1559931
rs1559931
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C2239176
Disease:
Liver carcinoma
0.010 GeneticVariation BEFREE Our study found that ICOS rs1559931 SNP was associated with decreased HBV-related HCC risk in the studied Chinese Han population, except for patients with natural clearance of HBV. 26074057 2015
dbSNP: rs4675379
rs4675379
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C0019163
Disease:
Hepatitis B
0.010 GeneticVariation BEFREE The CC genotype of rs4675379 was higher in patients with HBV infection (including AC, CHB, LC and HCC) than in patients with HBV clearance (P = 0.006). 26074057 2015
dbSNP: rs4675379
rs4675379
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C0009402
Disease:
Colorectal Carcinoma
0.010 GeneticVariation BEFREE Our findings suggest that rs7628626, rs13505, rs4404254, rs1559931, and rs4675379, through disrupting the regulatory role of miRNAs in the expression of B7/CD28 molecules, contribute to the occurrence and progress of colorectal cancer. 25497975 2015
dbSNP: rs4675379
rs4675379
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C4722085
Disease:
Malignant neoplasm of colon and/or rectum
0.010 GeneticVariation BEFREE Our findings suggest that rs7628626, rs13505, rs4404254, rs1559931, and rs4675379, through disrupting the regulatory role of miRNAs in the expression of B7/CD28 molecules, contribute to the occurrence and progress of colorectal cancer. 25497975 2015
dbSNP: rs4675379
rs4675379
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C2239176
Disease:
Liver carcinoma
0.010 GeneticVariation BEFREE The CC genotype of rs4675379 was higher in patients with HBV infection (including AC, CHB, LC and HCC) than in patients with HBV clearance (P = 0.006). 26074057 2015
dbSNP: rs1022059218
rs1022059218
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0007131
Disease:
Non-Small Cell Lung Carcinoma
0.010 GeneticVariation BEFREE Moreover, the constellation of alleles CTLA-4c.49A>G[A]/CT60[G]/CD28c.17+3T>C[T]/ICOSc.1554+4GT(8_15)[>10] increased the risk of NSCLC about 2-fold (p = 0.002). 21669243 2011
dbSNP: rs10932029
rs10932029
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.010 GeneticVariation BEFREE In rs10932029, compared with TT genotype and T allele, the CT genotype and C allele showed a significantly increased risk of breast cancer (P = 0.030, OR = 1.467, 95% CI 1.037-2.077; P = 0.017, OR = 1.481, 95% CI 1.070-2.049, respectively), and the associations were also significant in the validation cohort (P = 0.002, OR = 1.693, 95% CI 1.211-2.357; P = 0.003, OR = 1.607, 95% CI 1.171-2.204, respectively). 21917182 2011
dbSNP: rs10932029
rs10932029
Entrez Id: 29851;101927840
Gene Symbol: ICOS;LOC101927840
ICOS;LOC101927840
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE In rs10932029, compared with TT genotype and T allele, the CT genotype and C allele showed a significantly increased risk of breast cancer (P = 0.030, OR = 1.467, 95% CI 1.037-2.077; P = 0.017, OR = 1.481, 95% CI 1.070-2.049, respectively), and the associations were also significant in the validation cohort (P = 0.002, OR = 1.693, 95% CI 1.211-2.357; P = 0.003, OR = 1.607, 95% CI 1.171-2.204, respectively). 21917182 2011
dbSNP: rs746054383
rs746054383
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
CUI: C0009447
Disease:
Common Variable Immunodeficiency
0.010 GeneticVariation BEFREE We investigated a family with CVID and identified the heterozygous C104R TNFRSF13B mutation in two of the three index-children with CVID, a mother with selective immunoglobulin A deficiency, a mother with recurrent infections and a healthy grandfather. 19210517 2009