IRGM, immunity related GTPase M, 345611

N. diseases: 57; N. variants: 13
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11749391
rs11749391
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
0.700 GeneticVariation GWASCAT Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci. 26974007 2016
dbSNP: rs11741861
rs11741861
Entrez Id: 91975;345611
Gene Symbol: ZNF300;IRGM
ZNF300;IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
G 0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919 2015
dbSNP: rs4958847
rs4958847
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
0.030 GeneticVariation BEFREE Conversely, there was no association of rs13361189 or rs4958847 variant with risk of ulcerative colitis (UC). 24232856 2013
dbSNP: rs4958847
rs4958847
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
0.030 GeneticVariation BEFREE Allele and genotype frequencies of rs1000113 and rs4958847 were determined in 823 CD (265 younger than 19 years at diagnosis), 353 ulcerative colitis (UC) (130 younger than 19 years at diagnosis), and 578 controls. 19098858 2009
dbSNP: rs4958847
rs4958847
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
0.030 GeneticVariation BEFREE In addition, our meta-analysis data showed that IRGM rs13361189 and rs4958847 polymorphisms were associated with CD (rs13361189 C allele P=1.07 x 10(-19), pooled OR=1.34; rs4958847 A allele P=2.78 x 10(-17), pooled OR=1.31) and UC (rs13361189 P=0.0069, pooled OR=1.16; rs4958847 P=0.014, pooled OR=1.13). 19491842 2009
dbSNP: rs11747270
rs11747270
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
0.010 GeneticVariation BEFREE Two SNPs--rs11747270 and rs180802994--did not exhibit Hardy-Weinberg equilibrium but were associated with both Crohn's disease and ulcerative colitis in this population. 25191865 2014
dbSNP: rs180802994
rs180802994
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
0.010 GeneticVariation BEFREE Two SNPs--rs11747270 and rs180802994--did not exhibit Hardy-Weinberg equilibrium but were associated with both Crohn's disease and ulcerative colitis in this population. 25191865 2014
dbSNP: rs1000113
rs1000113
Entrez Id: 345611
Gene Symbol: IRGM
IRGM
CUI: C0009324
Disease:
Ulcerative Colitis
0.010 GeneticVariation BEFREE Allele and genotype frequencies of rs1000113 and rs4958847 were determined in 823 CD (265 younger than 19 years at diagnosis), 353 ulcerative colitis (UC) (130 younger than 19 years at diagnosis), and 578 controls. 19098858 2009