PITX3, paired like homeodomain 3, 5309

N. diseases: 93; N. variants: 8
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10786662
rs10786662
Entrez Id: 5309;83401
Gene Symbol: PITX3;ELOVL3
PITX3;ELOVL3
CUI: C0021704
Disease:
Intelligence
C 0.700 GeneticVariation GWASCAT A combined analysis of genetically correlated traits identifies 187 loci and a role for neurogenesis and myelination in intelligence. 29326435 2019
dbSNP: rs10786662
rs10786662
Entrez Id: 5309;83401
Gene Symbol: PITX3;ELOVL3
PITX3;ELOVL3
CUI: C0021704
Disease:
Intelligence
C 0.700 GeneticVariation GWASCAT Study of 300,486 individuals identifies 148 independent genetic loci influencing general cognitive function. 29844566 2018
dbSNP: rs10786662
rs10786662
Entrez Id: 5309;83401
Gene Symbol: PITX3;ELOVL3
PITX3;ELOVL3
CUI: C0004238
Disease:
Atrial Fibrillation
G 0.700 GeneticVariation GWASCAT Multi-ethnic genome-wide association study for atrial fibrillation. 29892015 2018
dbSNP: rs10786662
rs10786662
Entrez Id: 5309;83401
Gene Symbol: PITX3;ELOVL3
PITX3;ELOVL3
CUI: C0021704
Disease:
Intelligence
0.700 GeneticVariation GWASCAT Large-Scale Cognitive GWAS Meta-Analysis Reveals Tissue-Specific Neural Expression and Potential Nootropic Drug Targets. 29186694 2017
dbSNP: rs1411557416
rs1411557416
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C4551992
Disease:
ANTERIOR SEGMENT DYSGENESIS 1
GCCCAGGCCCTGCAGGGC 0.700 CausalMutation CLINVAR Novel and recurrent PITX3 mutations in Belgian families with autosomal dominant congenital cataract and anterior segment dysgenesis have similar phenotypic and functional characteristics. 24555714 2014
dbSNP: rs1411557416
rs1411557416
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C1864567
Disease:
CATARACT, POSTERIOR POLAR, 4 (disorder)
GCCCAGGCCCTGCAGGGC 0.700 CausalMutation CLINVAR Novel and recurrent PITX3 mutations in Belgian families with autosomal dominant congenital cataract and anterior segment dysgenesis have similar phenotypic and functional characteristics. 24555714 2014
dbSNP: rs1411557416
rs1411557416
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C1864567
Disease:
CATARACT, POSTERIOR POLAR, 4 (disorder)
GCCCAGGCCCTGCAGGGC 0.700 CausalMutation CLINVAR Functional analysis of human mutations in homeodomain transcription factor PITX3. 17888164 2007
dbSNP: rs1411557416
rs1411557416
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C4551992
Disease:
ANTERIOR SEGMENT DYSGENESIS 1
GCCCAGGCCCTGCAGGGC 0.700 CausalMutation CLINVAR Functional analysis of human mutations in homeodomain transcription factor PITX3. 17888164 2007
dbSNP: rs104894175
rs104894175
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C1864567
Disease:
CATARACT, POSTERIOR POLAR, 4 (disorder)
0.700 GeneticVariation UNIPROT Recurrent 17 bp duplication in PITX3 is primarily associated with posterior polar cataract (CPP4). 15286169 2004
dbSNP: rs104894175
rs104894175
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C1864567
Disease:
CATARACT, POSTERIOR POLAR, 4 (disorder)
0.700 GeneticVariation UNIPROT A novel homeobox gene PITX3 is mutated in families with autosomal-dominant cataracts and ASMD. 9620774 1998
dbSNP: rs1564991256
rs1564991256
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C3807151
Disease:
CATARACT 11, POSTERIOR POLAR, WITH MICROPHTHALMIA AND NEURODEVELOPMENTAL ABNORMALITIES
G 0.700 CausalMutation CLINVAR
dbSNP: rs1564991256
rs1564991256
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C3807150
Disease:
CATARACT 11, POSTERIOR POLAR
G 0.700 CausalMutation CLINVAR
dbSNP: rs2281983
rs2281983
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE This study investigates whether a common polymorphism in the PITX3 gene (rs2281983), which is of importance for the function of dopaminergic neurons, affects the risk of developing dementia in PD and whether it affects dopamine transporter (DAT) uptake. 28991698 2017
dbSNP: rs2281983
rs2281983
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE The results of the meta-analysis suggest that rs3758549, rs2281983, and rs4919621 SNPs are not major determinants of the risk for PD. 24525476 2014
dbSNP: rs4919621
rs4919621
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE The results of the meta-analysis suggest that rs3758549, rs2281983, and rs4919621 SNPs are not major determinants of the risk for PD. 24525476 2014
dbSNP: rs2281983
rs2281983
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE Subgroup analysis of early onset PD (EOPD) and late onset PD (LOPD) revealed that the rs2281983 allele C and rs4919621 allele A were significantly associated with the risk of PD (all of the P values were ≤ 0.0001) in EOPD population. 22429667 2012
dbSNP: rs2281983
rs2281983
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE Previous finding suggesting three SNPs (rs2281983, rs4919621 and rs3758549) in the PITX3 gene to be associated with PD could not be replicated. 22411443 2012
dbSNP: rs4919621
rs4919621
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE This meta-analysis finds that rs4919621 allele A was significantly associated with PD in the Caucasian population (P=0.04,). 22429667 2012
dbSNP: rs4919621
rs4919621
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE Previous finding suggesting three SNPs (rs2281983, rs4919621 and rs3758549) in the PITX3 gene to be associated with PD could not be replicated. 22411443 2012
dbSNP: rs2281983
rs2281983
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE Several studies have indicated that three PITX3 single nucleotide polymorphisms (SNPs), rs2281983, rs4919621 and rs3758549, are likely to be associated with Parkinson's disease (PD) in Caucasians. 22037506 2011
dbSNP: rs2281983
rs2281983
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE We did not identify any mutations except rs2281983, but when we extended the analysis of rs2281983 and 2 intron variants (rs4919621 and rs3758549) in 336 patients with Parkinson's disease and 244 controls, we found that rs2281983 and rs4919621 appeared to confer susceptibility to Parkinson's disease, especially in early-onset Parkinson's disease and familial Parkinson's disease. 21469209 2011
dbSNP: rs4919621
rs4919621
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE Recent association studies indicated that three PITX3 single nucleotide polymorphisms (SNPs), including rs2281983, rs4919621, and rs3758549 are likely to be associated with PD. 21565251 2011
dbSNP: rs4919621
rs4919621
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE We did not identify any mutations except rs2281983, but when we extended the analysis of rs2281983 and 2 intron variants (rs4919621 and rs3758549) in 336 patients with Parkinson's disease and 244 controls, we found that rs2281983 and rs4919621 appeared to confer susceptibility to Parkinson's disease, especially in early-onset Parkinson's disease and familial Parkinson's disease. 21469209 2011
dbSNP: rs4919621
rs4919621
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0030567
Disease:
Parkinson Disease
0.060 GeneticVariation BEFREE Several studies have indicated that three PITX3 single nucleotide polymorphisms (SNPs), rs2281983, rs4919621 and rs3758549, are likely to be associated with Parkinson's disease (PD) in Caucasians. 22037506 2011
dbSNP: rs104894175
rs104894175
Entrez Id: 5309
Gene Symbol: PITX3
PITX3
CUI: C0009691
Disease:
Congenital cataract
0.010 GeneticVariation BEFREE In Family 5, the c.38G>A (p.Ser13Asn) mutation segregated dominantly in a family with Peters anomaly, which is a novel phenotype associated with the c.38G>A variant compared with the previously reported isolated congenital cataract. 29405783 2018