SLC5A7, solute carrier family 5 member 7, 60482

N. diseases: 127; N. variants: 12
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs886039768
rs886039768
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
0.800 GeneticVariation UNIPROT Impaired Presynaptic High-Affinity Choline Transporter Causes a Congenital Myasthenic Syndrome with Episodic Apnea. 27569547 2016
dbSNP: rs147656110
rs147656110
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
A 0.800 CausalMutation CLINVAR
dbSNP: rs147656110
rs147656110
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
0.800 GeneticVariation UNIPROT
dbSNP: rs886039768
rs886039768
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
G 0.800 CausalMutation CLINVAR
dbSNP: rs886039765
rs886039765
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
0.700 GeneticVariation UNIPROT Impaired Presynaptic High-Affinity Choline Transporter Causes a Congenital Myasthenic Syndrome with Episodic Apnea. 27569547 2016
dbSNP: rs886039766
rs886039766
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
0.700 GeneticVariation UNIPROT Impaired Presynaptic High-Affinity Choline Transporter Causes a Congenital Myasthenic Syndrome with Episodic Apnea. 27569547 2016
dbSNP: rs1331713195
rs1331713195
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
0.700 GeneticVariation UNIPROT
dbSNP: rs1558872865
rs1558872865
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C1834703
Disease:
Neuropathy, Distal Hereditary Motor, Type VIIA
A 0.700 CausalMutation CLINVAR
dbSNP: rs375397889
rs375397889
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
0.700 GeneticVariation UNIPROT
dbSNP: rs886039767
rs886039767
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
G 0.700 GeneticVariation CLINVAR
dbSNP: rs886039767
rs886039767
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C4310694
Disease:
MYASTHENIC SYNDROME, CONGENITAL, 20, PRESYNAPTIC
G 0.700 CausalMutation CLINVAR
dbSNP: rs1013940
rs1013940
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0598589
Disease:
Inherited neuropathies
0.010 GeneticVariation BEFREE ADME analyses identified associations between VIPN and ABCC1 rs3784867 (P = 5.34 × 10<sup>-5</sup> ; OR = 4.9), and SLC5A7 rs1013940 (P = 9.00 × 10<sup>-4</sup> ; OR= 8.6); genes involved in vincristine transport and inherited neuropathies, respectively. 29999516 2019
dbSNP: rs1259002559
rs1259002559
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0751882
Disease:
Myasthenic Syndromes, Congenital
0.010 GeneticVariation BEFREE We report the identification and functional characterization of a novel pathogenic variant in SLC5A7, c.788C>T (p.Ser263Phe) in an El Salvadorian family with a lethal form of a congenital myasthenic syndrome characterized by fetal akinesia. 31299140 2019
dbSNP: rs1259002559
rs1259002559
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C1276035
Disease:
Pena-Shokeir syndrome type I
0.010 GeneticVariation BEFREE We report the identification and functional characterization of a novel pathogenic variant in SLC5A7, c.788C>T (p.Ser263Phe) in an El Salvadorian family with a lethal form of a congenital myasthenic syndrome characterized by fetal akinesia. 31299140 2019
dbSNP: rs1013940
rs1013940
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0040517
Disease:
Gilles de la Tourette syndrome
0.010 GeneticVariation BEFREE To investigate the association between the SLC5A7 polymorphisms and Tourette syndrome (TS) in the Chinese Han population, the SNP rs1013940, rs2433718, and rs4676169 were genotyped in 401 TS trios and 400 controls. 28830823 2017
dbSNP: rs2433718
rs2433718
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0040517
Disease:
Gilles de la Tourette syndrome
0.010 GeneticVariation BEFREE To investigate the association between the SLC5A7 polymorphisms and Tourette syndrome (TS) in the Chinese Han population, the SNP rs1013940, rs2433718, and rs4676169 were genotyped in 401 TS trios and 400 controls. 28830823 2017
dbSNP: rs4676169
rs4676169
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0040517
Disease:
Gilles de la Tourette syndrome
0.010 GeneticVariation BEFREE To investigate the association between the SLC5A7 polymorphisms and Tourette syndrome (TS) in the Chinese Han population, the SNP rs1013940, rs2433718, and rs4676169 were genotyped in 401 TS trios and 400 controls. 28830823 2017
dbSNP: rs1013940
rs1013940
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0011570
Disease:
Mental Depression
0.010 GeneticVariation BEFREE MPT analyses show significant associations of the norepinephrine transporter (NET, SLC6A2) -182 T/C (rs2242446) with recurrent depression [odds ratio, OR = 4.15 (1.91-9.02)], NET -3081 A/T (rs28386840) with increase in appetite [OR = 3.58 (1.53-8.39)] and the presynaptic choline transporter (CHT, SLC5A7) Ile89Val (rs1013940) with HAM-D-17 total score {i.e. overall depression severity [OR = 2.74 (1.05-7.18)]}. 18081710 2008
dbSNP: rs1013940
rs1013940
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0221480
Disease:
Recurrent depression
0.010 GeneticVariation BEFREE MPT analyses show significant associations of the norepinephrine transporter (NET, SLC6A2) -182 T/C (rs2242446) with recurrent depression [odds ratio, OR = 4.15 (1.91-9.02)], NET -3081 A/T (rs28386840) with increase in appetite [OR = 3.58 (1.53-8.39)] and the presynaptic choline transporter (CHT, SLC5A7) Ile89Val (rs1013940) with HAM-D-17 total score {i.e. overall depression severity [OR = 2.74 (1.05-7.18)]}. 18081710 2008
dbSNP: rs1013940
rs1013940
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0011581
Disease:
Depressive disorder
0.010 GeneticVariation BEFREE MPT analyses show significant associations of the norepinephrine transporter (NET, SLC6A2) -182 T/C (rs2242446) with recurrent depression [odds ratio, OR = 4.15 (1.91-9.02)], NET -3081 A/T (rs28386840) with increase in appetite [OR = 3.58 (1.53-8.39)] and the presynaptic choline transporter (CHT, SLC5A7) Ile89Val (rs1013940) with HAM-D-17 total score {i.e. overall depression severity [OR = 2.74 (1.05-7.18)]}. 18081710 2008
dbSNP: rs1013940
rs1013940
Entrez Id: 60482
Gene Symbol: SLC5A7
SLC5A7
CUI: C0344315
Disease:
Depressed mood
0.010 GeneticVariation BEFREE MPT analyses show significant associations of the norepinephrine transporter (NET, SLC6A2) -182 T/C (rs2242446) with recurrent depression [odds ratio, OR = 4.15 (1.91-9.02)], NET -3081 A/T (rs28386840) with increase in appetite [OR = 3.58 (1.53-8.39)] and the presynaptic choline transporter (CHT, SLC5A7) Ile89Val (rs1013940) with HAM-D-17 total score {i.e. overall depression severity [OR = 2.74 (1.05-7.18)]}. 18081710 2008