SLC11A1, solute carrier family 11 member 1, 6556

N. diseases: 141; N. variants: 14
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.030 GeneticVariation BEFREE We found a significant association between INT4 and RA (P = 0.004, odds ratio: 2.06, 95% CI: 1.24-3.41), but no significant differences between 5' promoter, D543N, 3'UTR polymorphisms and RA. 19055603 2009
dbSNP: rs3731865
rs3731865
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0041296
Disease:
Tuberculosis
0.030 GeneticVariation BEFREE SLC11A1 polymorphism rs3731865 was associated with TB in African-Americans, consistent with previous findings in West Africans. 19723394 2009
dbSNP: rs3731865
rs3731865
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0041296
Disease:
Tuberculosis
0.030 GeneticVariation BEFREE We analysed four NRAMP1 gene polymorphisms including 5' promoter (GT)(n) (rs34448891), INT4 (469 + 14G/C) (rs3731865), 3'UTR (1729 + 55del4) (rs17235416) and D543N (codon 543, Asp to Asn) (rs17235409) in 112 patients with TB, 98 patients with RA, 80 healthy controls for TB and 122 healthy controls for RA using ARMS-PCR and PCR-RFLP. 19055603 2009
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.030 GeneticVariation BEFREE Three NRAMP1 polymorphisms (823C/T, D543N and 1729+55del4) were significantly associated with RA. 10719815 2000
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023290
Disease:
Leishmaniasis, Visceral
0.020 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023283
Disease:
Leishmaniasis, Cutaneous
0.020 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs2279015
rs2279015
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023290
Disease:
Leishmaniasis, Visceral
0.020 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023283
Disease:
Leishmaniasis, Cutaneous
0.020 GeneticVariation BEFREE The results indicated that genetic variations of D543N (rs17235409) might be associated with susceptibility to CL infection. 27681549 2017
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0085568
Disease:
Buruli Ulcer
0.020 GeneticVariation BEFREE A previously reported SNP in <i>SLC11A1</i> (<i>NRAMP</i>, rs17235409) tended to be associated with BU. 29046669 2017
dbSNP: rs17235416
rs17235416
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0041296
Disease:
Tuberculosis
0.020 GeneticVariation BEFREE Further, significant associations were identified between the 469+14G/C, 1730G/A and 1729+55del4 polymorphisms (rs3731865, rs17235409 and rs17235416, respectively) and both infectious disease per se and tuberculosis. 25856512 2015
dbSNP: rs2279015
rs2279015
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023290
Disease:
Leishmaniasis, Visceral
0.020 GeneticVariation BEFREE Alleles rs2276631-C (P = 0.02; OR [95%CI] = 2.11 [1.16-3.86]) and rs2279015-G (P = 0.005; OR [95%CI] = 2.42 [1.33-4.41]) of SLC11A1, were associated with susceptibility to VL, whereas genotypes rs2276631 C/C (P = 0.003; OR [95%CI] = 2.65 [1.41-5.00]) and rs2279015 G/G (P = 0.018; OR [95%CI] = 2.05 [1.15-3.64]) were significantly increased in CL and VL patients, respectively. 25603101 2015
dbSNP: rs3731865
rs3731865
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.020 GeneticVariation BEFREE Significant associations were observed between the 469+14G/C polymorphism (rs3731865) and autoimmune disease (OR=1.30 (1.04-1.64)) and rheumatoid arthritis (OR=1.60 (1.20-2.13)) and between the -237C/T polymorphism (rs7573065) and inflammatory bowel disease (OR=0.60 (0.43-0.84)). 25856512 2015
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023290
Disease:
Leishmaniasis, Visceral
0.020 GeneticVariation BEFREE Two polymorphisms were each significantly associated in the genotypes with visceral leishmaniasis: 823C/T in exon 8 and D543N in exon 15 when comparing visceral leishmaniasis and DTH+ groups. 25151047 2014
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0004943
Disease:
Behcet Syndrome
0.020 GeneticVariation BEFREE We analyzed the association of NRAMP1 polymorphisms [(GT)( n ), INT4, 3'UTR and D543N] in 102 Turkish patients with BS and 102 healthy subjects by using amplification refractory mutation system-polymerase chain reaction (ARMS-PCR). 18998137 2009
dbSNP: rs17235416
rs17235416
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0041296
Disease:
Tuberculosis
0.020 GeneticVariation BEFREE We analysed four NRAMP1 gene polymorphisms including 5' promoter (GT)(n) (rs34448891), INT4 (469 + 14G/C) (rs3731865), 3'UTR (1729 + 55del4) (rs17235416) and D543N (codon 543, Asp to Asn) (rs17235409) in 112 patients with TB, 98 patients with RA, 80 healthy controls for TB and 122 healthy controls for RA using ARMS-PCR and PCR-RFLP. 19055603 2009
dbSNP: rs3731865
rs3731865
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.020 GeneticVariation BEFREE We analysed four NRAMP1 gene polymorphisms including 5' promoter (GT)(n) (rs34448891), INT4 (469 + 14G/C) (rs3731865), 3'UTR (1729 + 55del4) (rs17235416) and D543N (codon 543, Asp to Asn) (rs17235409) in 112 patients with TB, 98 patients with RA, 80 healthy controls for TB and 122 healthy controls for RA using ARMS-PCR and PCR-RFLP. 19055603 2009
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0085568
Disease:
Buruli Ulcer
0.020 GeneticVariation BEFREE D543N was significantly associated with Buruli ulcer: the odds ratio (adjusted for gender, age, and region of the participant) of the GA genotype versus the GG genotype was 2.89 (95% confidence intervals (CI): 1.41-5.91). 16395392 2006
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0004943
Disease:
Behcet Syndrome
0.020 GeneticVariation BEFREE In addition, the distributions of genotypes and alleles of D543N were similar between BD patients and controls (p>0.05). 17062442 2006
dbSNP: rs17221959
rs17221959
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.010 GeneticVariation BEFREE CONCLUSIONS This study suggested that the TT genotype and T allele in rs17221959 decreased RA risk. 31316048 2019
dbSNP: rs17221959
rs17221959
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023290
Disease:
Leishmaniasis, Visceral
0.010 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs17221959
rs17221959
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023283
Disease:
Leishmaniasis, Cutaneous
0.010 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs17235416
rs17235416
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023290
Disease:
Leishmaniasis, Visceral
0.010 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs17235416
rs17235416
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023283
Disease:
Leishmaniasis, Cutaneous
0.010 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs2279015
rs2279015
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0023283
Disease:
Leishmaniasis, Cutaneous
0.010 GeneticVariation BEFREE We found that rs17235409 (D543N) and rs17235416 (1729 + 55del4) are significantly associated with a risk for cutaneous leishmaniasis (CL), whereas rs17221959, rs2279015, and rs17235409 are associated with visceral leishmaniasis (VL). 31230160 2019
dbSNP: rs17235409
rs17235409
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0041834
Disease:
Erythema
0.010 GeneticVariation BEFREE Interactions between ITPKC rs28493229_GG and SLC11A1 rs17235409_GA and between ITPKC rs10420685_GG and SLC11A1 rs17235409_AA were strongly associated with BCG injection site erythema. 29214786 2018