STX1A, syntaxin 1A, 6804

N. diseases: 74; N. variants: 9
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs875342
rs875342
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C1263846
Disease:
Attention deficit hyperactivity disorder
0.020 GeneticVariation BEFREE We found for the first time that rs3793243 GG genotype carriers had a lower risk of ADHD compared with AA genotype (OR 0.564, 95% confidence interval (CI) 0.406-0.692, P = 0.001), and rs875342 was also associated with children ADHD (OR 1.806, 95% CI 1.349-2.591, P = 0.001). 30976917 2019
dbSNP: rs2228607
rs2228607
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C1263846
Disease:
Attention deficit hyperactivity disorder
0.020 GeneticVariation BEFREE This study evaluates, for we believe the first time, polymorphisms on the SNARE complex-related genes STX1A (rs2228607), VAMP2 (26bp Ins/Del) and SYT1 (rs1880867 and rs2251214) on the response to immediate-release methylphenidate (IR-MPH) in a naturalistic sample of adults with ADHD. 28461697 2018
dbSNP: rs2228607
rs2228607
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C1263846
Disease:
Attention deficit hyperactivity disorder
0.020 GeneticVariation BEFREE We tested the association between ADHD and polymorphisms on the SNARE genes STX1A (rs2228607), SYT1 (rs1880867 and rs2251214), VAMP2 (26bp Ins/Del) and SNAP25 (rs6108461 and rs8636) on a sample comprised of 548 adults with ADHD and 644 non-affected controls. 28130000 2017
dbSNP: rs875342
rs875342
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C1263846
Disease:
Attention deficit hyperactivity disorder
0.020 GeneticVariation BEFREE Genotypic distribution of rs875342 of STX1A was significantly different between ADHD and controls. 25445064 2015
dbSNP: rs4363087
rs4363087
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0149931
Disease:
Migraine Disorders
0.020 GeneticVariation BEFREE The transmission disequilibrium test revealed significant transmission distortion of rs4363087 in migraine overall (OR = 1.56, p = 0.006; p = 0.01 after correction for multiple testing) and migraine without aura (OR = 1.58, p = 0.01; corrected p = 0.04). 22250207 2012
dbSNP: rs941298
rs941298
Entrez Id: 6804;100422948
Gene Symbol: STX1A;MIR4284
STX1A;MIR4284
CUI: C0338480
Disease:
Common Migraine
0.020 GeneticVariation BEFREE Combined analysis showed significant association of rs941298 with migraine overall (OR = 1.28, p = 0.004) and migraine without aura (OR = 1.3, p = 0.008). 22250207 2012
dbSNP: rs941298
rs941298
Entrez Id: 6804;100422948
Gene Symbol: STX1A;MIR4284
STX1A;MIR4284
CUI: C0149931
Disease:
Migraine Disorders
0.020 GeneticVariation BEFREE In particular, the TT genotype of rs941298 is associated with an increased risk of both migraine in general and migraine without aura; the GG and GT genotypes for rs6951030 are also associated with migraine, while the GT genotype of rs6951030 was found to be significant in the migraine without aura group. 20385907 2010
dbSNP: rs941298
rs941298
Entrez Id: 6804;100422948
Gene Symbol: STX1A;MIR4284
STX1A;MIR4284
CUI: C0338480
Disease:
Common Migraine
0.020 GeneticVariation BEFREE In particular, the TT genotype of rs941298 is associated with an increased risk of both migraine in general and migraine without aura; the GG and GT genotypes for rs6951030 are also associated with migraine, while the GT genotype of rs6951030 was found to be significant in the migraine without aura group. 20385907 2010
dbSNP: rs4363087
rs4363087
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0149931
Disease:
Migraine Disorders
0.020 GeneticVariation BEFREE We subsequently performed a haplotype-based analysis and observed evidence of an overrepresentation of the A-T-G (rs6951030-rs941298-rs4363087) allelic combination in migraine patients and an increased frequency of carriers of this risk haplotype (P=0.008, OR=1.71). 19368856 2009
dbSNP: rs941298
rs941298
Entrez Id: 6804;100422948
Gene Symbol: STX1A;MIR4284
STX1A;MIR4284
CUI: C0149931
Disease:
Migraine Disorders
0.020 GeneticVariation BEFREE When the control series was enlarged for rs941298, we confirmed the association only with the whole migraine group. 19368856 2009
dbSNP: rs1569061
rs1569061
Entrez Id: 6804;114049
Gene Symbol: STX1A;BUD23
STX1A;BUD23
CUI: C0026769
Disease:
Multiple Sclerosis
0.010 GeneticVariation BEFREE CC, syntaxin rs1569061 1A gene for 33-bp promoter region TC haplotypes, and synaptotagmin XI gene were found to be associated with an increased risk for multiple sclerosis (p=0.012). 30582321 2019
dbSNP: rs3793243
rs3793243
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C1263846
Disease:
Attention deficit hyperactivity disorder
0.010 GeneticVariation BEFREE We found for the first time that rs3793243 GG genotype carriers had a lower risk of ADHD compared with AA genotype (OR 0.564, 95% confidence interval (CI) 0.406-0.692, P = 0.001), and rs875342 was also associated with children ADHD (OR 1.806, 95% CI 1.349-2.591, P = 0.001). 30976917 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C1270972
Disease:
Mild cognitive disorder
0.010 GeneticVariation BEFREE Notably, in MCI, visual selective attention impairment was associated with the STX1a rs4717806 AA (pc = 0.027) genotype as well as the SNAP-25/STX1a rs363050/rs4717806 AA/A (pc = 0.022) combination. 30958380 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE Genotype distribution of STX1a rs4717806 and rs2293489 resulted significantly different in AD compared to HC (p = 0.032 and p = 0.047, respectively). 30958380 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0151744
Disease:
Myocardial Ischemia
0.010 GeneticVariation BEFREE Among genetic polymorphisms, rs4717806(A) and r</span>s2293489(T), as well as the rs4717806 - rs2293489 (A-T) haplotype were associated with higher risk for IHD (Pc = .02; Pc = .02; P = .04, respectively). 31192914 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0011849
Disease:
Diabetes Mellitus
0.010 GeneticVariation BEFREE Finally, a statistical association of rs4717806(AA) genotype with higher TyG index in IHD patients (P = .03) was highlighted by multiple regression analysis considering log-transformed biochemical parameters as dependent variable and presence of coronary artery disease, age, gender, waist circumference, presence of diabetes as predictors. 31192914 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0010068
Disease:
Coronary heart disease
0.010 GeneticVariation BEFREE Finally, a statistical association of rs4717806(AA) genotype with higher TyG index in IHD patients (P = .03) was highlighted by multiple regression analysis considering log-transformed biochemical parameters as dependent variable and presence of coronary artery disease, age, gender, waist circumference, presence of diabetes as predictors. 31192914 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0010054
Disease:
Coronary Arteriosclerosis
0.010 GeneticVariation BEFREE Finally, a statistical association of rs4717806(AA) genotype with higher TyG index in IHD patients (P = .03) was highlighted by multiple regression analysis considering log-transformed biochemical parameters as dependent variable and presence of coronary artery disease, age, gender, waist circumference, presence of diabetes as predictors. 31192914 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C1956346
Disease:
Coronary Artery Disease
0.010 GeneticVariation BEFREE Finally, a statistical association of rs4717806(AA) genotype with higher TyG index in IHD patients (P = .03) was highlighted by multiple regression analysis considering log-transformed biochemical parameters as dependent variable and presence of coronary artery disease, age, gender, waist circumference, presence of diabetes as predictors. 31192914 2019
dbSNP: rs4717806
rs4717806
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0011847
Disease:
Diabetes
0.010 GeneticVariation BEFREE Finally, a statistical association of rs4717806(AA) genotype with higher TyG index in IHD patients (P = .03) was highlighted by multiple regression analysis considering log-transformed biochemical parameters as dependent variable and presence of coronary artery disease, age, gender, waist circumference, presence of diabetes as predictors. 31192914 2019
dbSNP: rs2228607
rs2228607
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C0010674
Disease:
Cystic Fibrosis
0.010 GeneticVariation BEFREE The same STX1A risk allele was recognized in the European CF Twin and Sibling Study (P=0.0027), demonstrating that the genotype-phenotype association of STX1A to CF disease severity is robust enough to allow replication in two independent CF populations. rs4363087 is in linkage disequilibrium to the exonic variant rs2228607 (c.204C>T). 23572023 2013
dbSNP: rs4363087
rs4363087
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0010674
Disease:
Cystic Fibrosis
0.010 GeneticVariation BEFREE The same STX1A risk allele was recognized in the European CF Twin and Sibling Study (P=0.0027), demonstrating that the genotype-phenotype association of STX1A to CF disease severity is robust enough to allow replication in two independent CF populations. rs4363087 is in linkage disequilibrium to the exonic variant rs2228607 (c.204C>T). 23572023 2013
dbSNP: rs4363087
rs4363087
Entrez Id: 6804;114049;105375350
Gene Symbol: STX1A;BUD23;LOC105375350
STX1A;BUD23;LOC105375350
CUI: C0338480
Disease:
Common Migraine
0.010 GeneticVariation BEFREE The transmission disequilibrium test revealed significant transmission distortion of rs4363087 in migraine overall (OR = 1.56, p = 0.006; p = 0.01 after correction for multiple testing) and migraine without aura (OR = 1.58, p = 0.01; corrected p = 0.04). 22250207 2012
dbSNP: rs3793243
rs3793243
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C0338480
Disease:
Common Migraine
0.010 GeneticVariation BEFREE In the haplotype-based analysis, we found an underrepresentation of the T-C-T haplotype (rs3793243-rs941298-rs6951030) in the global sample and in migraine without aura group. 20385907 2010
dbSNP: rs6951030
rs6951030
Entrez Id: 6804
Gene Symbol: STX1A
STX1A
CUI: C0149931
Disease:
Migraine Disorders
0.010 GeneticVariation BEFREE In addition, we found rs6951030 to also be associated in Portuguese migraine patients. 20385907 2010