SYN1, synapsin I, 6853

N. diseases: 80; N. variants: 16
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs137852560
rs137852560
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1845343
Disease:
Epilepsy, X-Linked, with Variable Learning Disabilities and Behavior Disorders
T 0.700 CausalMutation CLINVAR
dbSNP: rs1556857481
rs1556857481
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1845343
Disease:
Epilepsy, X-Linked, with Variable Learning Disabilities and Behavior Disorders
TG 0.700 GeneticVariation CLINVAR
dbSNP: rs1556860663
rs1556860663
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1845343
Disease:
Epilepsy, X-Linked, with Variable Learning Disabilities and Behavior Disorders
A 0.700 GeneticVariation CLINVAR
dbSNP: rs200533370
rs200533370
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1845343
Disease:
Epilepsy, X-Linked, with Variable Learning Disabilities and Behavior Disorders
C 0.700 CausalMutation CLINVAR
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1845343
Disease:
Epilepsy, X-Linked, with Variable Learning Disabilities and Behavior Disorders
A 0.700 CausalMutation CLINVAR
dbSNP: rs397514680
rs397514680
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1845343
Disease:
Epilepsy, X-Linked, with Variable Learning Disabilities and Behavior Disorders
T 0.700 CausalMutation CLINVAR
dbSNP: rs41298474
rs41298474
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1845343
Disease:
Epilepsy, X-Linked, with Variable Learning Disabilities and Behavior Disorders
A 0.700 GeneticVariation CLINVAR
dbSNP: rs6609533
rs6609533
Entrez Id: 6853;7076;100616147
Gene Symbol: SYN1;TIMP1;MIR4769
SYN1;TIMP1;MIR4769
CUI: C0022578
Disease:
Keratoconus
0.020 GeneticVariation BEFREE <b>Conclusions</b>: This study supports the hypothesis of a functional role for <i>COL4A3</i> (rs55703767, G/T), <i>MMP-9</i> (rs17576, A/G) and <i>TIMP-1</i> (rs6609533, A/G) SNPs in the pathogenesis of keratoconus. 31397194 2020
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0011581
Disease:
Depressive disorder
0.010 GeneticVariation BEFREE Q555X-hSynI induced larger facilitation and post-tetanic potentiation in excitatory synapses and stronger depression after long trains in inhibitory synapses. 23406870 2013
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0344315
Disease:
Depressed mood
0.010 GeneticVariation BEFREE Q555X-hSynI induced larger facilitation and post-tetanic potentiation in excitatory synapses and stronger depression after long trains in inhibitory synapses. 23406870 2013
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0011570
Disease:
Mental Depression
0.010 GeneticVariation BEFREE Q555X-hSynI induced larger facilitation and post-tetanic potentiation in excitatory synapses and stronger depression after long trains in inhibitory synapses. 23406870 2013
dbSNP: rs4898
rs4898
Entrez Id: 6853;7076;100616147
Gene Symbol: SYN1;TIMP1;MIR4769
SYN1;TIMP1;MIR4769
CUI: C0036421
Disease:
Systemic Scleroderma
0.010 GeneticVariation BEFREE A candidate gene for TIMP-1 gene located on the X-chromosome (rs4898) was selected for a control case study to investigate a possible association of this SNP with the susceptibility to systemic sclerosis and its digit ulcer manifestation. 22820628 2012
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0476254
Disease:
Dyslexia
0.010 GeneticVariation BEFREE A new Q555X mutation on the SYN1 gene was recently found in several members of a family segregating dyslexia, epilepsy, and autism spectrum disorder. 29671924 2018
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0524528
Disease:
Pervasive Development Disorder
0.020 GeneticVariation BEFREE A new Q555X mutation on the SYN1 gene was recently found in several members of a family segregating dyslexia, epilepsy, and autism spectrum disorder. 29671924 2018
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.020 GeneticVariation BEFREE A new Q555X mutation on the SYN1 gene was recently found in several members of a family segregating dyslexia, epilepsy, and autism spectrum disorder. 29671924 2018
dbSNP: rs397514680
rs397514680
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0004352
Disease:
Autistic Disorder
0.010 GeneticVariation BEFREE Additional mutations in SYN1 (A51G, A550T and T567A) were found in 1.0 and 3.5% of French-Canadian individuals with autism and epilepsy, respectively. 21441247 2011
dbSNP: rs200533370
rs200533370
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0004352
Disease:
Autistic Disorder
0.010 GeneticVariation BEFREE Additional mutations in SYN1 (A51G, A550T and T567A) were found in 1.0 and 3.5% of French-Canadian individuals with autism and epilepsy, respectively. 21441247 2011
dbSNP: rs200533370
rs200533370
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0014544
Disease:
Epilepsy
0.010 GeneticVariation BEFREE Additional mutations in SYN1 (A51G, A550T and T567A) were found in 1.0 and 3.5% of French-Canadian individuals with autism and epilepsy, respectively. 21441247 2011
dbSNP: rs4898
rs4898
Entrez Id: 6853;7076;100616147
Gene Symbol: SYN1;TIMP1;MIR4769
SYN1;TIMP1;MIR4769
CUI: C0085215
Disease:
Ovarian Failure, Premature
0.010 GeneticVariation BEFREE Among the four TIMP loci, the TIMP1T > C (rs4898), TIMP1G > A (rs6609533), TIMP2G > C (rs8179090), TIMP2G > A (rs2277698), TIMP3G > A (rs135029), and TIMP4T > C (rs3755724) haplotypes were identified more frequently in POI patients than in control subjects and conferred susceptibility to POI (P <0.0001). 30583769 2019
dbSNP: rs6609533
rs6609533
Entrez Id: 6853;7076;100616147
Gene Symbol: SYN1;TIMP1;MIR4769
SYN1;TIMP1;MIR4769
CUI: C0085215
Disease:
Ovarian Failure, Premature
0.010 GeneticVariation BEFREE Among the four TIMP loci, the TIMP1T > C (rs4898), TIMP1G > A (rs6609533), TIMP2G > C (rs8179090), TIMP2G > A (rs2277698), TIMP3G > A (rs135029), and TIMP4T > C (rs3755724) haplotypes were identified more frequently in POI patients than in control subjects and conferred susceptibility to POI (P <0.0001). 30583769 2019
dbSNP: rs2070584
rs2070584
Entrez Id: 6853;7076;100616147
Gene Symbol: SYN1;TIMP1;MIR4769
SYN1;TIMP1;MIR4769
CUI: C0162871
Disease:
Aortic Aneurysm, Abdominal
0.010 GeneticVariation BEFREE Analyses with one polymorphism per test without interactions showed an association with the two TIMP1 gene polymorphisms (nt+434, P = .0047; rs2070584, P = .015) in male subjects without a family history of AAA. 15944607 2005
dbSNP: rs4898
rs4898
Entrez Id: 6853;7076;100616147
Gene Symbol: SYN1;TIMP1;MIR4769
SYN1;TIMP1;MIR4769
CUI: C0339573
Disease:
Glaucoma, Primary Open Angle
0.030 GeneticVariation BEFREE Association of MMP1-1607 1G/2G and TIMP1 372 T/C gene polymorphisms with risk of primary open angle glaucoma in a Polish population. 21709637 2011
dbSNP: rs4898
rs4898
Entrez Id: 6853;7076;100616147
Gene Symbol: SYN1;TIMP1;MIR4769
SYN1;TIMP1;MIR4769
CUI: C0019196
Disease:
Hepatitis C
0.020 GeneticVariation BEFREE Besides normal routine laboratory testing for HCV, patients' sera were evaluated also for retinol, retinol-binding protein 4 and the following SNPs: PNPLA3 (rs738409), TM6SF2 (rs58542926), MBOAT7 (rs641738), IL28B (rs12979860), TIMP-1 (rs4898), TIMP-2 (rs8179090), NF-kB promoter (rs28362491). 31826071 2019
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C0454651
Disease:
Specific language impairment
0.010 GeneticVariation BEFREE Detailed neuropsychological assessments revealed that SYN1 Q555X male mutation carriers showed specific language impairment and mild autistic spectrum disorder. 26096837 2015
dbSNP: rs397514679
rs397514679
Entrez Id: 6853
Gene Symbol: SYN1
SYN1
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.020 GeneticVariation BEFREE Detailed neuropsychological assessments revealed that SYN1 Q555X male mutation carriers showed specific language impairment and mild autistic spectrum disorder. 26096837 2015