PSCA, prostate stem cell antigen, 8000

N. diseases: 111; N. variants: 14
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Our study confirms an association between the PSCA rs2294008 C-allele and the risk of DU in a Japanese population. 31839644 2019
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Recently, three genome-wide association studies have identified the PSCA (prostate stem cell antigen) rs2294008 polymorphism (C > T) associated with susceptibility to gastric cancer, bladder cancer, and duodenal ulcers, highlighting its critical role in disease pathogenesis. 27001215 2016
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Frequency of PSCA rs2294008 C/C genotype in duodenal ulcer was 36.1%, which was significantly higher than those with gastric cancer (12.4%), gastric ulcer (19.0%), gastritis (10.7%), and H. pylori-negatives (19.5%) (p < .001). 25582162 2015
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE Genomic DNA from 603 Spanish patients with primary GC, 139 with DU and 675 healthy controls was typed for the PSCA rs2294008C>T polymorphism by PCR-TaqMan assays. 25721731 2015
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE From these results we conclude that the PSCA rs2294008 polymorphism is involved in the susceptibility to GC and DU, as well as in the prognosis of the diffuse-type of GC in Caucasians. 25721731 2015
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.860 GeneticVariation BEFREE The T allele of rs2294008 encodes a translation initiation codon upstream of the reported site and changes protein localization from the cytoplasm to the cell surface. rs505922 at ABO was also associated with duodenal ulcer in a recessive model (OR = 1.32; P = 1.15 × 10(-10)). 22387998 2012
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
C 0.860 GeneticVariation GWASCAT The T allele of rs2294008 encodes a translation initiation codon upstream of the reported site and changes protein localization from the cytoplasm to the cell surface. rs505922 at ABO was also associated with duodenal ulcer in a recessive model (OR = 1.32; P = 1.15 × 10(-10)). 22387998 2012
dbSNP: rs2294008
rs2294008
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
C 0.860 GeneticVariation GWASDB The T allele of rs2294008 encodes a translation initiation codon upstream of the reported site and changes protein localization from the cytoplasm to the cell surface. rs505922 at ABO was also associated with duodenal ulcer in a recessive model (OR = 1.32; P = 1.15 × 10(-10)). 22387998 2012
dbSNP: rs1045574
rs1045574
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0013295
Disease:
Duodenal Ulcer
0.700 GeneticVariation GWASDB A genome-wide association study identifies two susceptibility loci for duodenal ulcer in the Japanese population. 22387998 2012
dbSNP: rs2920283
rs2920283
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.700 GeneticVariation GWASDB A genome-wide association study identifies two susceptibility loci for duodenal ulcer in the Japanese population. 22387998 2012
dbSNP: rs2920297
rs2920297
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.700 GeneticVariation GWASDB A genome-wide association study identifies two susceptibility loci for duodenal ulcer in the Japanese population. 22387998 2012
dbSNP: rs138377917
rs138377917
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
CUI: C0013295
Disease:
Duodenal Ulcer
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs2976391
rs2976391
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs2976392
rs2976392
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019
dbSNP: rs9297976
rs9297976
Entrez Id: 8000;8629
Gene Symbol: PSCA;JRK
PSCA;JRK
CUI: C0013295
Disease:
Duodenal Ulcer
0.010 GeneticVariation BEFREE Cumulative evidence of an association was graded as strong for rs2294008 [odds ratio (OR) = 1.32, P = 5.1 × 10-33], rs2976392 (OR = 1.29, P = 1.8 × 10-8), rs9297976 (OR = 0.75, P = 1.4 × 10-7), rs2976391 (OR = 1.38, P = 6.1 × 10-5) and rs138377917 (OR = 0.53, P = 0.008) with gastric cancer, rs2294008 with bladder cancer (OR = 1.15, P = 8.0 × 10-19), gastritis (OR = 1.35, P = 1.2 × 10-5), duodenal ulcer (OR = 0.68, P = 2.4 × 10-57) and gastric ulcer (OR = 0.88, P = 1.7 × 10-7). 30407486 2019