Source: GWASCAT

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2241880
rs2241880
ATG16L1 ; SCARNA5
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		G 0.900 GeneticVariation GWASCAT Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis. 17435756

2007
dbSNP: rs11209026
rs11209026
IL23R
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.900 GeneticVariation GWASCAT Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789

2007
dbSNP: rs11209026
rs11209026
IL23R
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.900 GeneticVariation GWASCAT Novel Crohn disease locus identified by genome-wide association maps to a gene desert on 5p13.1 and modulates expression of PTGER4. 17447842

2007
dbSNP: rs7517847
rs7517847
IL23R ; C1orf141
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.880 GeneticVariation GWASCAT Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis. 17435756

2007
dbSNP: rs2542151
rs2542151
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		G 0.880 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs2542151
rs2542151
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.880 GeneticVariation GWASCAT Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility. 17554261

2007
dbSNP: rs1004819
rs1004819
IL23R ; C1orf141
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.860 GeneticVariation GWASCAT Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789

2007
dbSNP: rs2201841
rs2201841
IL23R ; C1orf141
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 GeneticVariation GWASCAT Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789

2007
dbSNP: rs13361189
rs13361189
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 GeneticVariation GWASCAT Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility. 17554261

2007
dbSNP: rs10889677
rs10889677
IL23R
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 GeneticVariation GWASCAT Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789

2007
dbSNP: rs1000113
rs1000113
IRGM
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		T 0.840 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs2076756
rs2076756
NOD2
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 GeneticVariation GWASCAT Systematic association mapping identifies NELL1 as a novel IBD disease gene. 17684544

2007
dbSNP: rs2076756
rs2076756
NOD2
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 GeneticVariation GWASCAT Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis. 17435756

2007
dbSNP: rs10883365
rs10883365
LINC01475
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		G 0.830 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs10883365
rs10883365
LINC01475
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 GeneticVariation GWASCAT Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility. 17554261

2007
dbSNP: rs9858542
rs9858542
BSN
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		A 0.810 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs9858542
rs9858542
BSN
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 GeneticVariation GWASCAT Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility. 17554261

2007
dbSNP: rs5743289
rs5743289
NOD2
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 GeneticVariation GWASCAT Novel Crohn disease locus identified by genome-wide association maps to a gene desert on 5p13.1 and modulates expression of PTGER4. 17447842

2007
dbSNP: rs5743289
rs5743289
NOD2
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 GeneticVariation GWASCAT Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789

2007
dbSNP: rs224136
rs224136
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 GeneticVariation GWASCAT Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis. 17435756

2007
dbSNP: rs17234657
rs17234657
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		G 0.810 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs17221417
rs17221417
NOD2
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		G 0.810 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs11805303
rs11805303
IL23R ; C1orf141
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		T 0.810 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs10210302
rs10210302
ATG16L1
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		T 0.810 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300

2007
dbSNP: rs9988642
rs9988642
IL23R
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 GeneticVariation GWASCAT Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789

2007