Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 22915
Gene Symbol: MMRN1
MMRN1
0.010 Biomarker disease BEFREE Fibronectin, an extracellular matrix (ECM) protein, has been thought to be involved in pathogenic mechanisms of kidney stone disease, especially calcium oxalate (CaOx) type. 30701361 2019
Entrez Id: 5599
Gene Symbol: MAPK8
MAPK8
0.010 Biomarker disease BEFREE ROS and JNK pathways may contribute to CNP-induced cell injury and kidney stone formation. 29511793 2019
Entrez Id: 23411
Gene Symbol: SIRT1
SIRT1
0.010 GeneticVariation disease BEFREE However, we did not find a significant association between the 6 SNPs of the SIRT1 gene and kidney stone formation in the Eastern Chinese population. 30714469 2019
Entrez Id: 50507
Gene Symbol: NOX4
NOX4
0.010 Biomarker disease BEFREE In conclusion, OA could be used as a NOX4 inhibitor to prevent kidney stones. 31117291 2019
Entrez Id: 5251
Gene Symbol: PHEX
PHEX
0.010 GeneticVariation disease BEFREE Hypophosphatemic rickets, mostly of the X-linked dominant form caused by pathogenic variants of the PHEX gene, poses therapeutic challenges with consequences for growth and bone development and portends a high risk of fractions and poor bone healing, dental problems and nephrolithiasis/nephrocalcinosis. 30454743 2019
Entrez Id: 8527
Gene Symbol: DGKD
DGKD
0.010 GeneticVariation disease BEFREE In a validation cohort of only nephrolithiasis patients, the CYP24A1-associated locus correlates with serum calcium concentration and a number of nephrolithiasis episodes while the DGKD-associated locus correlates with urinary calcium excretion. 31729369 2019
Entrez Id: 2925
Gene Symbol: GRPR
GRPR
0.010 AlteredExpression disease BEFREE Taken together, we conclude that GRPR gene silencing suppresses the development of the EMT and formation of the calcium oxalate crystal in renal TECs of kidney stones through the inactivation of the PI3K/Akt signaling pathway. 30144073 2019
Entrez Id: 6524
Gene Symbol: SLC5A2
SLC5A2
0.010 Biomarker disease BEFREE Nephrolithiasis and sodium-glucose co-transporter-2 (SGLT-2) inhibitors: A meta-analysis of randomized controlled trials. 31401152 2019
Entrez Id: 5450
Gene Symbol: POU2AF1
POU2AF1
0.010 GeneticVariation disease BEFREE Of the four signals associated with urine pH, we note that the pH-increasing alleles of two variants (POU2AF1, WDR72) associate significantly with increased risk of kidney stones. 30476138 2019
Entrez Id: 9213
Gene Symbol: XPR1
XPR1
0.010 AlteredExpression disease BEFREE Activation of liver X receptor suppresses osteopontin expression and ameliorates nephrolithiasis. 30623435 2019
Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
0.010 AlteredExpression disease BEFREE Taken together, we conclude that GRPR gene silencing suppresses the development of the EMT and formation of the calcium oxalate crystal in renal TECs of kidney stones through the inactivation of the PI3K/Akt signaling pathway. 30144073 2019
Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
0.010 GeneticVariation disease BEFREE GSTM1 and GSTT1 null genotypes are not a risk features for nephrolithiasis. 31445152 2019
Entrez Id: 54363
Gene Symbol: HAO1
HAO1
0.010 Biomarker disease BEFREE In human, GOX is involved in the production of oxalate, which is a key metabolite in the formation of kidney stone. 30143257 2018
Entrez Id: 4585
Gene Symbol: MUC4
MUC4
0.010 Biomarker disease BEFREE Data sets of nephrolithiasis were searched using GEO database and a heat flow map was drawn.Then MUC4 function was predicted. 29843125 2018
Entrez Id: 7462
Gene Symbol: LAT2
LAT2
0.010 Biomarker disease BEFREE We discussed in detail comorbidity and lab marker variables independently associated with KS (e.g. blood chloride, candidiasis, sleep disorders). 30119627 2018
Entrez Id: 5579
Gene Symbol: PRKCB
PRKCB
0.010 AlteredExpression disease BEFREE We conclude that ADO inhibits oxalate transport by lowering PAT1 surface expression in C2 cells through signaling pathways including the A<sub>2B</sub> AR, PKC, and phospholipase C. Given higher ADO levels and overexpression of the A<sub>2B</sub> AR in inflammatory bowel disease (IBD), our findings have potential relevance to pathophysiology of IBD-associated hyperoxaluria and related KS. 30020825 2018
Entrez Id: 28996
Gene Symbol: HIPK2
HIPK2
0.010 GeneticVariation disease BEFREE HIPK2 polymorphisms rs2058265, rs6464214, and rs7456421 were associated with kidney stone disease in Chinese males not females. 29428801 2018
Entrez Id: 50617
Gene Symbol: ATP6V0A4
ATP6V0A4
0.010 GeneticVariation disease BEFREE However, heterozygous carriers of ATP6V1B1 and ATP6V0A4 mutations may have a higher risk of developing nephrolithiasis and nephrocalcinosis in adulthood, respectively. 28994037 2018
Entrez Id: 491
Gene Symbol: ATP2B2
ATP2B2
0.010 Biomarker disease BEFREE In summary, a large number of novel PMCA2-interacting proteins have been defined and a novel function of PMCA2 as a COM crystal-binding protein sheds light onto its involvement, at least in part, in kidney stone pathogenesis. 29085954 2018
Entrez Id: 29116
Gene Symbol: MYLIP
MYLIP
0.010 Biomarker disease BEFREE The reviewed applications of MIR spectroscopy include (1) quantification of clinical parameters in body fluids, (2) diagnosis and monitoring of cancer and other diseases by analysis of body fluids, cells, and tissues, (3) classification of clinically relevant microorganisms, and (4) analysis of kidney stones, nails, and faecal fat. 29239240 2018
Entrez Id: 7177
Gene Symbol: TPSAB1
TPSAB1
0.010 AlteredExpression disease BEFREE TPS2, with moderate Mw, showed the strongest antioxidant activity and repair effect; it may become a potential drug for prevention and treatment of kidney stones. 30584463 2018
Entrez Id: 5578
Gene Symbol: PRKCA
PRKCA
0.010 AlteredExpression disease BEFREE We conclude that ADO inhibits oxalate transport by lowering PAT1 surface expression in C2 cells through signaling pathways including the A<sub>2B</sub> AR, PKC, and phospholipase C. Given higher ADO levels and overexpression of the A<sub>2B</sub> AR in inflammatory bowel disease (IBD), our findings have potential relevance to pathophysiology of IBD-associated hyperoxaluria and related KS. 30020825 2018
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.010 Biomarker disease BEFREE Expression of CCL-2, CCL-5, CCL-7, CCR-2, CD40, CSF1, CXCL-9, CXCL-10, Fas-L, RIPK2, SELE, and TLR-3 is markedly elevated in the papillary tips, kidney urine, and bladder urine of nephrolithiasis patients. 29338314 2018
Entrez Id: 823
Gene Symbol: CAPN1
CAPN1
0.010 Biomarker disease BEFREE Knockdown of HSP90 by small-interfering RNA (siHSP90) causes significant changes in levels of HSP70, α-tubulin, β-actin, vimentin, and calpain-1, all of which are calcium oxalate (CaOx) crystal-binding proteins that play significant roles in kidney stone formation. 30508278 2018
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.010 AlteredExpression disease BEFREE We conclude that ADO inhibits oxalate transport by lowering PAT1 surface expression in C2 cells through signaling pathways including the A<sub>2B</sub> AR, PKC, and phospholipase C. Given higher ADO levels and overexpression of the A<sub>2B</sub> AR in inflammatory bowel disease (IBD), our findings have potential relevance to pathophysiology of IBD-associated hyperoxaluria and related KS. 30020825 2018