Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.010 Biomarker disease BEFREE A Diverse Lipid Antigen-Specific TCR Repertoire Is Clonally Expanded during Active Tuberculosis. 29914888 2018
Entrez Id: 3645
Gene Symbol: INSRR
INSRR
0.010 Biomarker disease BEFREE Regarding the proximal variables in relation to diagnosis, in the multiple model, the detection of tuberculosis was associated with the proportion of teams that conduct contact investigation (increase in Incidence Rate Ratio [IRR] = 2.97%, 95%CI 2.41-3.53), carry out tuberculosis active case finding (increase in IRR = 2.17%, 95%CI 1.48-2.87), and request culture for mycobacteria (increase in IRR = 1.87%, 95%CI 0.98-2.76). 29791528 2018
Entrez Id: 944
Gene Symbol: TNFSF8
TNFSF8
0.010 Biomarker disease BEFREE In Mtb-infected humans, CD153 defines a subset of highly polyfunctional Mtb-specific CD4 T cells that are much more abundant in individuals with controlled latent Mtb infection compared to those with active tuberculosis. 30202016 2018
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.010 GeneticVariation disease BEFREE Our findings in two independent samples indicated that SNPs in TLR8 and TLR9 were associated with the development of TB, and highlight that SNPs may have different effects on disease pathogenesis and progression. 30424735 2018
Entrez Id: 51311
Gene Symbol: TLR8
TLR8
0.010 GeneticVariation disease BEFREE The A-allele of TLR8 rs3764880 SNP was protective against the development of TB in males (A vs G, OR = 0.58, 95%CI = 0.37-0.91). 30424735 2018
Entrez Id: 952
Gene Symbol: CD38
CD38
0.010 AlteredExpression disease BEFREE Treatment induced phenotypic changes from baseline until week 9 and until week 12 differed substantially between individual aTB patients and correlated with an individual's time to stable sputum culture conversion for expression of CD38 and HLA-DR (both <i>p</i> < 0.05). 30323818 2018
Entrez Id: 10219
Gene Symbol: KLRG1
KLRG1
0.010 AlteredExpression disease BEFREE KLRG1 expression on CD4+ T cells was significantly increased in patients with active tuberculosis, compared with healthy controls and patients without tuberculosis. 29373700 2018
Entrez Id: 836
Gene Symbol: CASP3
CASP3
0.010 AlteredExpression disease BEFREE Using polychromatic flow cytometry, we evaluated the expression of caspase-3 in Mtb-specific CD4<sup>+</sup> T cells from LTBI and ATB as well as from ATB patients undergoing anti-TB treatment. 29983703 2018
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.010 Biomarker disease BEFREE We sought to identify immune markers in Mtb-specific IFN-γ<sup>+</sup>CD4<sup>+</sup> T cells and hypothesized that expression of caspase-3 Mtb-specific CD4<sup>+</sup> T cells would be associated with ATB. 29983703 2018
Entrez Id: 3133
Gene Symbol: HLA-E
HLA-E
0.010 Biomarker disease BEFREE We confirm in this study the significantly increased ex vivo frequency of Mtb-peptide/HLA-E-TM<sup>+</sup> CD8<sup>+</sup> T cells in the circulation of patients with active tuberculosis (TB). 29124751 2018
Entrez Id: 55647
Gene Symbol: RAB20
RAB20
0.010 AlteredExpression disease BEFREE Rab20 is specifically and significantly upregulated in the sputum of human patients with active tuberculosis. 28494243 2017
Entrez Id: 94025
Gene Symbol: MUC16
MUC16
0.010 Biomarker disease BEFREE Statistical analysis showed that sensitivity of CA 125 was 75%, specificity was (68%) and positive predictive value was 12% in patients with active tuberculosis. 29278633 2017
Entrez Id: 4498
Gene Symbol: MT1JP
MT1JP
0.010 Biomarker disease BEFREE Mtb genes expressed in classical granulomas with central, caseous necrosis, as well as within the caseum itself, were identified and compared with other Mtb lesions in animals with ATB (n = 7) or LTBI (n = 7). 28135421 2017
Entrez Id: 7060
Gene Symbol: THBS4
THBS4
0.010 Biomarker disease BEFREE Differential expression was also highly significant (<i>P</i> < 10<sup>-20</sup>) for previously described TB markers, such as IP-10, LBP, FCG3B, and TSP4, and for many novel proteins not previously associated with TB. 28794177 2017
Entrez Id: 56729
Gene Symbol: RETN
RETN
0.010 Biomarker disease BEFREE Receiver operating characteristic curve (ROC) analysis showed that the areas under the curve (AUC) for RETN and KLK1 were 0.844 (0.783-0.904) and 0.833 (0.769-0.897), respectively, when discriminating TB from LTBI. 29348876 2017
Entrez Id: 27161
Gene Symbol: AGO2
AGO2
0.010 GeneticVariation disease BEFREE To describe the factors associated with the induction of monocyte mitochondrial and membrane damage in response to PPD as well as determine if this type of damage might predict the susceptibility of developing active tuberculosis in a cohort of household contacts (HHCs) from Medellin, Colombia from 2005 to 2008. 28222109 2017
Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
0.010 Biomarker disease BEFREE Inhibition of the PI3K-Akt-mTOR signaling pathway in T lymphocytes in patients with active tuberculosis. 28416440 2017
Entrez Id: 5291
Gene Symbol: PIK3CB
PIK3CB
0.010 Biomarker disease BEFREE Inhibition of the PI3K-Akt-mTOR signaling pathway in T lymphocytes in patients with active tuberculosis. 28416440 2017
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.010 GeneticVariation disease BEFREE To describe the factors associated with the induction of monocyte mitochondrial and membrane damage in response to PPD as well as determine if this type of damage might predict the susceptibility of developing active tuberculosis in a cohort of household contacts (HHCs) from Medellin, Colombia from 2005 to 2008. 28222109 2017
Entrez Id: 3687
Gene Symbol: ITGAX
ITGAX
0.010 AlteredExpression disease BEFREE BTLA-expressing CD11c antigen presenting cells in patients with active tuberculosis exhibit low capacity to stimulate T cell proliferation. 27717503 2017
Entrez Id: 30813
Gene Symbol: VSX1
VSX1
0.010 GeneticVariation disease BEFREE To describe the factors associated with the induction of monocyte mitochondrial and membrane damage in response to PPD as well as determine if this type of damage might predict the susceptibility of developing active tuberculosis in a cohort of household contacts (HHCs) from Medellin, Colombia from 2005 to 2008. 28222109 2017
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.010 Biomarker disease BEFREE Inhibition of the PI3K-Akt-mTOR signaling pathway in T lymphocytes in patients with active tuberculosis. 28416440 2017
Entrez Id: 54892
Gene Symbol: NCAPG2
NCAPG2
0.010 Biomarker disease BEFREE Mtb genes expressed in classical granulomas with central, caseous necrosis, as well as within the caseum itself, were identified and compared with other Mtb lesions in animals with ATB (n = 7) or LTBI (n = 7). 28135421 2017
Entrez Id: 10077
Gene Symbol: TSPAN32
TSPAN32
0.010 Biomarker disease BEFREE Multiple micronutrientsWe conducted analyses across antiretroviral therapy (ART)-naive adults (3 trials, 1448 participants), adults on antiretroviral therapy (ART) (1 trial, 400 participants), and ART-naive adults with concurrent active tuberculosis (3 trials, 1429 participants). 28518221 2017
Entrez Id: 6614
Gene Symbol: SIGLEC1
SIGLEC1
0.010 GeneticVariation disease BEFREE Polymorphisms in SIGLEC1 contribute to susceptibility to pulmonary active tuberculosis possibly through the modulation of IL-1ß. 28964857 2017