Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.020 GeneticVariation disease BEFREE Age- and gender-specific effects on NRAMP1 gene polymorphisms and risk of the development of active tuberculosis in Tunisian populations. 22609013 2012
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.050 Biomarker disease BEFREE All M. tuberculosis-specific CD4+ subsets, with the exception of IL-2-only cells, switched from central to effector memory phenotype in active tuberculosis vs latent tuberculosis infection, accompanied by a reduction in IL-7 receptor α (CD127) expression. 23966657 2013
Entrez Id: 3593
Gene Symbol: IL12B
IL12B
0.020 Biomarker disease BEFREE Along with prior studies demonstrating that therapy with IL-12 (the cytokine encoded in part by IL12B, associated with longer survival following MTB infection in mice deficient in CD4 T cells), our results suggest that this pathway might be an excellent target for the development of new modalities for treating TB, especially for HIV-positive individuals. 26942285 2016
Entrez Id: 5034
Gene Symbol: P4HB
P4HB
0.020 Biomarker disease BEFREE Although estimated TB incidence in Eritrea, Morocco and Romania was 100/100 000 person-years (py), the probability of being QFT-GIT-positive in individuals from these countries were not statistically significantly different from individuals from countries with TB incidence > 250/100 000 person-years. 30236183 2018
Entrez Id: 5034
Gene Symbol: P4HB
P4HB
0.020 Biomarker disease BEFREE Although having some heterogeneity in detecting interferon-γ release, both the QFT-GIT and T-SPOT.TB demonstrated high concordance in diagnosing ATB. 29651163 2018
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.010 GeneticVariation disease BEFREE Analyses were conducted to test for main effects of vitamin D status and SNPs in VDR (rs731236, rs2228570 and rs1544410), DBP (rs7041 and rs4588) and CYP2R1 (rs2060793, rs10500804 and rs10766197) on susceptibility to TB, and to investigate whether these SNPs modify the association between vitamin D status and disease susceptibility. 27160686 2016
Entrez Id: 120227
Gene Symbol: CYP2R1
CYP2R1
0.010 GeneticVariation disease BEFREE Analyses were conducted to test for main effects of vitamin D status and SNPs in VDR (rs731236, rs2228570 and rs1544410), DBP (rs7041 and rs4588) and CYP2R1 (rs2060793, rs10500804 and rs10766197) on susceptibility to TB, and to investigate whether these SNPs modify the association between vitamin D status and disease susceptibility. 27160686 2016
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.050 Biomarker disease BEFREE Application of IFN-γ/IL-2 FluoroSpot assay for distinguishing active tuberculosis from non-active tuberculosis: A cohort study. 31454491 2019
Entrez Id: 9235
Gene Symbol: IL32
IL32
0.010 Biomarker disease BEFREE As maintaining M. tuberculosis in a latent state and preventing transition to active disease may represent a form of host resistance, these results identify IL-32 as one functional marker and potential correlate of protection against active tuberculosis. 25143364 2014
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Biological therapy using TNF-α inhibitors is very effective but is associated with an increased risk of opportunistic infections, including active tuberculosis. 29792084 2018
Entrez Id: 3687
Gene Symbol: ITGAX
ITGAX
0.010 AlteredExpression disease BEFREE BTLA-expressing CD11c antigen presenting cells in patients with active tuberculosis exhibit low capacity to stimulate T cell proliferation. 27717503 2017
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Combined IFN-γ and TNF-α release assay for differentiating active tuberculosis from latent tuberculosis infection. 29746954 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 Biomarker disease BEFREE Combined IFN-γ and TNF-α release assay for differentiating active tuberculosis from latent tuberculosis infection. 29746954 2018
Entrez Id: 2096
Gene Symbol: ESAT
ESAT
0.060 AlteredExpression disease BEFREE Compared with healthy controls, the levels of ESAT-6 and Ag85B were higher in patients with active tuberculosis (p<0.001). 28416440 2017
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Comparing interferon-gamma release assays with tuberculin skin test for identifying latent tuberculosis infection that progresses to active tuberculosis: systematic review and meta-analysis. 28274215 2017
Entrez Id: 10068
Gene Symbol: IL18BP
IL18BP
0.010 Biomarker disease BEFREE Complex co-expression of serum IL-18BP and IL-37, IP-10 and IFN-γ was identified as the highest discriminative biomarker set for the diagnosis of ATB. 31821340 2019
Entrez Id: 27178
Gene Symbol: IL37
IL37
0.010 Biomarker disease BEFREE Complex co-expression of serum IL-18BP and IL-37, IP-10 and IFN-γ was identified as the highest discriminative biomarker set for the diagnosis of ATB. 31821340 2019
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Complex co-expression of serum IL-18BP and IL-37, IP-10 and IFN-γ was identified as the highest discriminative biomarker set for the diagnosis of ATB. 31821340 2019
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Currently available interferon-γ release assays (IGRAs) are inadequate to diagnose active TB, with reported pooled sensitivity and specificity both under 81%. 30205963 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 Biomarker disease BEFREE Diagnostic accuracy of interferon-gamma-induced protein 10 for differentiating active tuberculosis from latent tuberculosis: A meta-analysis. 31388072 2019
Entrez Id: 3929
Gene Symbol: LBP
LBP
0.010 Biomarker disease BEFREE Differential expression was also highly significant (<i>P</i> < 10<sup>-20</sup>) for previously described TB markers, such as IP-10, LBP, FCG3B, and TSP4, and for many novel proteins not previously associated with TB. 28794177 2017
Entrez Id: 7060
Gene Symbol: THBS4
THBS4
0.010 Biomarker disease BEFREE Differential expression was also highly significant (<i>P</i> < 10<sup>-20</sup>) for previously described TB markers, such as IP-10, LBP, FCG3B, and TSP4, and for many novel proteins not previously associated with TB. 28794177 2017
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.060 Biomarker disease BEFREE Down-modulation of lung immune responses by interleukin-10 and transforming growth factor beta (TGF-beta) and analysis of TGF-beta receptors I and II in active tuberculosis. 15102771 2004
Entrez Id: 5478
Gene Symbol: PPIA
PPIA
0.010 Biomarker disease BEFREE Earlier, in our immunoproteomic analysis, we found that peptidyl-prolyl cis-trans isomerase A (PpiA) protein-containing fractions induced significantly higher interferon-gamma (IFN-γ) response in LTBI than in PTB. 26546406 2015
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 Biomarker disease BEFREE Expert commentary: Availability of non-anti-TNF targeted biologics, that are not associated with an increased risk of TB reactivation, offers a great opportunity to tailor a therapeutic intervention at low/absent TB risk. 29848120 2018