Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.100 Biomarker phenotype BEFREE In 16 QC rounds between 2010 and 2017, the four laboratories received 208 bone marrow (BM) samples (126 FL; 82 MCL); 187 were analyzed, according to the EuroMRD Consortium guidelines, by both nested (NEST) polymerase chain reaction (PCR) and real-time quantitative (RQ) PCR for BCL2/IGH MBR or IGHV rearrangements. 31325190 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 AlteredExpression phenotype BEFREE This uncertainty results largely from methodological differences relating to the use of real-time quantitative PCR (qRT-PCR) to measure BCR-ABL1 transcript levels for MRD analysis. 30858550 2019
Entrez Id: 6343
Gene Symbol: SCT
SCT
0.100 Biomarker phenotype BEFREE Maintenance therapy is started after SCT without detectable disease, while preemptive therapy is triggered by the detection of minimal residual disease (MRD). 30038353 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.100 Biomarker phenotype BEFREE Eight of 9 patients with MRD achieved BCR-ABL1 negativity (complete molecular response, CMR) after a median of one cycle; 2/2 patients without measurable disease durably maintained CMR. 30831480 2019
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.100 GeneticVariation phenotype BEFREE Minimal residual disease assessed with deep sequencing of NPM1 mutations predicts relapse after allogeneic stem cell transplant in AML. 30068244 2019
Entrez Id: 930
Gene Symbol: CD19
CD19
0.100 Biomarker phenotype BEFREE Monthly assessments of CD19+ minimal residual disease (MRD) and CAR-T engraftment demonstrated the anti-CD19 activity of long-term engrafted CAR-T cell clones in one patient for more than 2 years. 31465532 2019
Entrez Id: 10320
Gene Symbol: IKZF1
IKZF1
0.100 GeneticVariation phenotype BEFREE A distinct MRD high-risk subgroup of IGH-V(D)J-germline ALL revealed frequent deletions of IKZF1 (n = 7/11) and the presence of genomic fusions (n = 10/11). 31784504 2019
Entrez Id: 6343
Gene Symbol: SCT
SCT
0.100 Biomarker phenotype BEFREE Our findings suggest that haplo-SCT with FM conditioning regimen and PTCy-based GVHD prophylaxis has a protective effect, and may potentially abrogate the inferior outcomes of MRD positivity for patients with AML. 31595538 2019
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.100 GeneticVariation phenotype BEFREE Our findings suggest a relationship between the NPM1 mutant allele burden at diagnosis, and the presence of MRD at first remission. 31148220 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.100 Biomarker phenotype BEFREE BCR-ABL1 and CRLF2<sup>Re/Hi</sup><sub>,</sub> and that high CD99 mRNA levels are strongly associated with a high frequency of relapse, high proportion of positive for minimal residual disease at day 29 and poor overall survival in paediatric cohorts, which indicate that CD99 is a potential biomarker for BCP-ALL. 30484860 2019
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 Biomarker phenotype BEFREE The relative methylation level obtained during the follow-ups by MSP was compared to the MRD results obtained by the amplification of IG/TCR clonal rearrangements using the allele-specific quantitative-PCR (ASO-PCR) assay. 31486880 2019
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.100 Biomarker phenotype BEFREE In 16 QC rounds between 2010 and 2017, the four laboratories received 208 bone marrow (BM) samples (126 FL; 82 MCL); 187 were analyzed, according to the EuroMRD Consortium guidelines, by both nested (NEST) polymerase chain reaction (PCR) and real-time quantitative (RQ) PCR for BCL2/IGH MBR or IGHV rearrangements. 31325190 2019
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.100 GeneticVariation phenotype BEFREE This chapter provides all relevant background information and technical aspects for the complete laboratory process from detection of the clonal IGHV gene rearrangement and the chromosomal translocations at diagnosis to the actual MRD measurements in clinical follow-up samples of B-NHL. 30779036 2019
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 Biomarker phenotype BEFREE Minimal residual disease (MRD) measured by PCR of clonal IgH/TCR rearrangements predicts relapse in T-cell acute lymphoblastic leukemia (T-ALL) and serves as risk stratification tool. 30552401 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.100 Biomarker phenotype BEFREE A new highly sensitive real-time quantitative-PCR method for detection of BCR-ABL1 to monitor minimal residual disease in chronic myeloid leukemia after discontinuation of imatinib. 30835732 2019
Entrez Id: 930
Gene Symbol: CD19
CD19
0.100 Biomarker phenotype BEFREE A 10-year-old boy with B-ALL who never achieved minimal residual disease (MRD) negative status after 5 courses of chemotherapy was enrolled into our study and received a total of 3.19×10/kg autologous CD19 CAR-T-cells. 30198955 2019
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.100 GeneticVariation phenotype BEFREE A distinct MRD high-risk subgroup of IGH-V(D)J-germline ALL revealed frequent deletions of IKZF1 (n = 7/11) and the presence of genomic fusions (n = 10/11). 31784504 2019
Entrez Id: 930
Gene Symbol: CD19
CD19
0.100 Biomarker phenotype BEFREE Our findings suggest that anti-CD19 CAR-T cells therapy with a remarkable MRD eradicating ability might be an effective option for patients with relapsed and refractory E2A-PBX1 positive B-ALL. 30714847 2019
Entrez Id: 930
Gene Symbol: CD19
CD19
0.100 Biomarker phenotype BEFREE CD19-CAR-T therapy remarkably reduced the number of leukemia cells, and three patients achieved bone marrow remission (minimal residual disease negative). 31201998 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE A new highly sensitive real-time quantitative-PCR method for detection of BCR-ABL1 to monitor minimal residual disease in chronic myeloid leukemia after discontinuation of imatinib. 30835732 2019
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.100 GeneticVariation phenotype BEFREE Clinical and biological disease characteristics did not differ between the two subgroups of adolescents, including minimal residual disease (MRD) results during initial therapy, except for ETV6-RUNX1 frequency and gender. 31629941 2019
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker phenotype BEFREE We studied the CD34+CD38-CD123+ fraction in AML blasts at diagnosis, and its utility as a unique phenotype for minimal residual disease (MRD) of AML patients. 29065396 2018
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 GeneticVariation phenotype BEFREE Our report suggests a feasible pipeline, in terms of costs and reproducibility, aimed at characterizing and quantifying the genomic BCR-ABL1 rearrangement during MRD monitoring in CML patients. 29541390 2018
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.100 Biomarker phenotype BEFREE Evaluation of MRD level by flow cytometry or molecular techniques in the era of the new BCR and Bcl-2 targeted inhibitors could identify the most cost-effective and durable treatment sequencing. 28864095 2018
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.100 AlteredExpression phenotype BEFREE Wilms' tumor 1 (WT1) is overexpressed in various hematopoietic tumors and widely used as a marker of minimal residual disease. 28994041 2018